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Cluster: MGYG000000539_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000539_18 MGYG000000539_18_9 8542 9480 + 3.A.1.1.10
TC MGYG000000539_18 MGYG000000539_18_10 9492 10388 + 3.A.1.1.29
NULL(UNKNOWN) MGYG000000539_18 MGYG000000539_18_11 10405 12081 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000000539_18 MGYG000000539_18_12 12176 13648 + GH32
STP MGYG000000539_18 MGYG000000539_18_13 13676 14635 + PfkB
TC MGYG000000539_18 MGYG000000539_18_14 14930 16276 + 2.A.66.1.33
STP MGYG000000539_18 MGYG000000539_18_15 16863 17120 + PTS-HPr
TC MGYG000000539_18 MGYG000000539_18_16 17156 18775 + 8.A.7.1.1
sulfatase MGYG000000539_18 MGYG000000539_18_17 18789 19520 + S1_9
CAZyme MGYG000000539_18 MGYG000000539_18_18 19547 20659 + CE9
TC MGYG000000539_18 MGYG000000539_18_19 20663 21142 + 4.A.1.2.11
TC MGYG000000539_18 MGYG000000539_18_20 21209 22678 + 4.A.1.1.7
Gene ID: MGYG000000539_18_9
Type: TC
Location: 8542 - 9480 (+)
Gene ID: MGYG000000539_18_10
Type: TC
Location: 9492 - 10388 (+)
Gene ID: MGYG000000539_18_11
Type:
Location: 10405 - 12081 (+)
Gene ID: MGYG000000539_18_12
Type: CAZyme
Location: 12176 - 13648 (+)
Gene ID: MGYG000000539_18_13
Type: STP
Location: 13676 - 14635 (+)
Gene ID: MGYG000000539_18_14
Type: TC
Location: 14930 - 16276 (+)
Gene ID: MGYG000000539_18_15
Type: STP
Location: 16863 - 17120 (+)
Gene ID: MGYG000000539_18_16
Type: TC
Location: 17156 - 18775 (+)
Gene ID: MGYG000000539_18_17
Type: sulfatase
Location: 18789 - 19520 (+)
Gene ID: MGYG000000539_18_18
Type: CAZyme
Location: 19547 - 20659 (+)
Gene ID: MGYG000000539_18_19
Type: TC
Location: 20663 - 21142 (+)
Gene ID: MGYG000000539_18_20
Type: TC
Location: 21209 - 22678 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000000539_18_11 vegan > omnivore 2.16607 0.04449
MGYG000000539_18_17 vegetarian > vegan 1.21790 0.01057

🧭 Explore Read Mapping of CGC

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