Cluster: MGYG000000536_CGC3
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000000536
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000536_17 | MGYG000000536_17_7 | 5266 | 7161 | + | GH13_9 |
| pfam | MGYG000000536_17 | MGYG000000536_17_8 | 7154 | 8275 | + | NTP_transferase | Hexapep_GlmU |
| pfam | MGYG000000536_17 | MGYG000000536_17_9 | 8272 | 9369 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | MGYG000000536_17 | MGYG000000536_17_10 | 9381 | 10823 | + | GT5 |
| CAZyme | MGYG000000536_17 | MGYG000000536_17_11 | 10842 | 13283 | + | GT35 |
| CAZyme | MGYG000000536_17 | MGYG000000536_17_12 | 13296 | 15248 | + | GH13_39 |
| TC | MGYG000000536_17 | MGYG000000536_17_13 | 15287 | 16009 | - | 3.A.1.3.27 |
| TC | MGYG000000536_17 | MGYG000000536_17_14 | 16039 | 16767 | - | 3.A.1.3.15 |
| TC | MGYG000000536_17 | MGYG000000536_17_15 | 16760 | 17422 | - | 3.A.1.3.15 |
| TC | MGYG000000536_17 | MGYG000000536_17_16 | 17760 | 18395 | - | 2.A.53.3.8 |
| pfam | MGYG000000536_17 | MGYG000000536_17_17 | 18425 | 20515 | - | BRCT | DNA_ligase_aden | DNA_ligase_ZBD | DNA_ligase_OB | HHH_2 | HHH_5 | Nlig-Ia |
| TC | MGYG000000536_17 | MGYG000000536_17_18 | 20670 | 22097 | - | 2.A.23.1.5 |
Gene ID: MGYG000000536_17_7
Type: CAZyme
Location: 5266 - 7161 (+)
Type: CAZyme
Location: 5266 - 7161 (+)
Gene ID: MGYG000000536_17_8
Type: pfam
Location: 7154 - 8275 (+)
Type: pfam
Location: 7154 - 8275 (+)
Gene ID: MGYG000000536_17_9
Type: pfam
Location: 8272 - 9369 (+)
Type: pfam
Location: 8272 - 9369 (+)
Gene ID: MGYG000000536_17_10
Type: CAZyme
Location: 9381 - 10823 (+)
Type: CAZyme
Location: 9381 - 10823 (+)
Gene ID: MGYG000000536_17_11
Type: CAZyme
Location: 10842 - 13283 (+)
Type: CAZyme
Location: 10842 - 13283 (+)
Gene ID: MGYG000000536_17_12
Type: CAZyme
Location: 13296 - 15248 (+)
Type: CAZyme
Location: 13296 - 15248 (+)
Gene ID: MGYG000000536_17_13
Type: TC
Location: 15287 - 16009 (-)
Type: TC
Location: 15287 - 16009 (-)
Gene ID: MGYG000000536_17_14
Type: TC
Location: 16039 - 16767 (-)
Type: TC
Location: 16039 - 16767 (-)
Gene ID: MGYG000000536_17_15
Type: TC
Location: 16760 - 17422 (-)
Type: TC
Location: 16760 - 17422 (-)
Gene ID: MGYG000000536_17_16
Type: TC
Location: 17760 - 18395 (-)
Type: TC
Location: 17760 - 18395 (-)
Gene ID: MGYG000000536_17_17
Type: pfam
Location: 18425 - 20515 (-)
Type: pfam
Location: 18425 - 20515 (-)
Gene ID: MGYG000000536_17_18
Type: TC
Location: 20670 - 22097 (-)
Type: TC
Location: 20670 - 22097 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Cetobacterium_A
Species
Cetobacterium_A sp900766645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.