Cluster: MGYG000000440_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000440
- CGC Family ID: CGCFAM_10227
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000440_2 | MGYG000000440_2_317 | 320491 | 321303 | + | CE4 |
| CAZyme | MGYG000000440_2 | MGYG000000440_2_318 | 321300 | 321980 | + | CE4 |
| pfam | MGYG000000440_2 | MGYG000000440_2_319 | 321966 | 322988 | - | DUF624 |
| TC | MGYG000000440_2 | MGYG000000440_2_320 | 323799 | 324371 | - | 3.A.1.17.2 |
| TC | MGYG000000440_2 | MGYG000000440_2_321 | 324364 | 325134 | - | 3.A.1.17.5 |
Gene ID: MGYG000000440_2_317
Type: CAZyme
Location: 320491 - 321303 (+)
Type: CAZyme
Location: 320491 - 321303 (+)
Gene ID: MGYG000000440_2_318
Type: CAZyme
Location: 321300 - 321980 (+)
Type: CAZyme
Location: 321300 - 321980 (+)
Gene ID: MGYG000000440_2_319
Type: pfam
Location: 321966 - 322988 (-)
Type: pfam
Location: 321966 - 322988 (-)
Gene ID: MGYG000000440_2_320
Type: TC
Location: 323799 - 324371 (-)
Type: TC
Location: 323799 - 324371 (-)
Gene ID: MGYG000000440_2_321
Type: TC
Location: 324364 - 325134 (-)
Type: TC
Location: 324364 - 325134 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1865
Species
UMGS1865 sp934500855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000440_2_317 | vegan > omnivore | 1.69095 | 0.01124 |
| MGYG000000440_2_319 | vegan > omnivore | 1.49095 | 0.01124 |
| MGYG000000440_2_320 | vegan > omnivore | 1.55141 | 0.01124 |
| MGYG000000440_2_321 | vegan > omnivore | 1.55987 | 0.01124 |