dbCAN HGM

Cluster: MGYG000000409_CGC6

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	MGYG000000409_4	MGYG000000409_4_102	108496	109266	-	9.B.143.2.3
TF	MGYG000000409_4	MGYG000000409_4_103	109486	110388	+	HTH_1
pfam	MGYG000000409_4	MGYG000000409_4_104	110529	111218	+	RelA_SpoT
TC	MGYG000000409_4	MGYG000000409_4_105	111215	112252	+	3.A.11.1.3
pfam	MGYG000000409_4	MGYG000000409_4_106	112292	113347	-	YitT_membrane \| DUF2179
pfam	MGYG000000409_4	MGYG000000409_4_107	114001	114321	+	Glyco_hydro38C2
CAZyme	MGYG000000409_4	MGYG000000409_4_108	114646	115659	+	GH1
STP	MGYG000000409_4	MGYG000000409_4_109	115695	116339	+	SIS
pfam	MGYG000000409_4	MGYG000000409_4_110	116336	117280	+	ROK
TC	MGYG000000409_4	MGYG000000409_4_111	117504	118487	+	2.A.19.5.3

Gene ID: MGYG000000409_4_102
Type: TC
Location: 108496 - 109266 (-)

Gene ID: MGYG000000409_4_103
Type: TF
Location: 109486 - 110388 (+)

Gene ID: MGYG000000409_4_104
Type: pfam
Location: 110529 - 111218 (+)

Gene ID: MGYG000000409_4_105
Type: TC
Location: 111215 - 112252 (+)

Gene ID: MGYG000000409_4_106
Type: pfam
Location: 112292 - 113347 (-)

Gene ID: MGYG000000409_4_107
Type: pfam
Location: 114001 - 114321 (+)

Gene ID: MGYG000000409_4_108
Type: CAZyme
Location: 114646 - 115659 (+)

Gene ID: MGYG000000409_4_109
Type: STP
Location: 115695 - 116339 (+)

Gene ID: MGYG000000409_4_110
Type: pfam
Location: 116336 - 117280 (+)

Gene ID: MGYG000000409_4_111
Type: TC
Location: 117504 - 118487 (+)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Gene ID	Condition Pair	log2FC	FDR P-value
MGYG000000409_4_109	vegetarian > omnivore	1.16252	0.00089