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Cluster: MGYG000000409_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000409_14 MGYG000000409_14_13 17517 19418 + 3.A.1.106.14
CAZyme MGYG000000409_14 MGYG000000409_14_14 19574 22474 + GH106
CAZyme MGYG000000409_14 MGYG000000409_14_15 22531 24126 + GH78
pfam MGYG000000409_14 MGYG000000409_14_16 24517 25434 + Mem_trans | Mem_trans
NULL(UNKNOWN) MGYG000000409_14 MGYG000000409_14_17 25539 26864 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000000409_14 MGYG000000409_14_18 26861 27670 - 3.A.1.11.2
TC MGYG000000409_14 MGYG000000409_14_19 27667 28509 - 3.A.1.11.8
TC MGYG000000409_14 MGYG000000409_14_20 28506 30020 - 3.A.1.11.8
Gene ID: MGYG000000409_14_13
Type: TC
Location: 17517 - 19418 (+)
Gene ID: MGYG000000409_14_14
Type: CAZyme
Location: 19574 - 22474 (+)
Gene ID: MGYG000000409_14_15
Type: CAZyme
Location: 22531 - 24126 (+)
Gene ID: MGYG000000409_14_16
Type: pfam
Location: 24517 - 25434 (+)
Gene ID: MGYG000000409_14_17
Type:
Location: 25539 - 26864 (-)
Gene ID: MGYG000000409_14_18
Type: TC
Location: 26861 - 27670 (-)
Gene ID: MGYG000000409_14_19
Type: TC
Location: 27667 - 28509 (-)
Gene ID: MGYG000000409_14_20
Type: TC
Location: 28506 - 30020 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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