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Cluster: MGYG000000409_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000000409_12 MGYG000000409_12_44 46887 48392 + GH78
pfam MGYG000000409_12 MGYG000000409_12_45 48337 51216 + FIVAR | FIVAR | FIVAR | CHB_HEX_C_1
TC MGYG000000409_12 MGYG000000409_12_46 51695 52396 - 9.B.20.1.4
TF MGYG000000409_12 MGYG000000409_12_47 52775 53656 - HTH_AraC
CAZyme MGYG000000409_12 MGYG000000409_12_48 54023 55093 + GH179
pfam MGYG000000409_12 MGYG000000409_12_49 55106 56161 + GFO_IDH_MocA | GFO_IDH_MocA_C | KARI_N | GFO_IDH_MocA_C3
pfam MGYG000000409_12 MGYG000000409_12_50 56177 57022 + AP_endonuc_2
TC MGYG000000409_12 MGYG000000409_12_51 57041 58837 + 3.A.1.1.10
TC MGYG000000409_12 MGYG000000409_12_52 58852 59727 + 3.A.1.1.29
Gene ID: MGYG000000409_12_44
Type: CAZyme
Location: 46887 - 48392 (+)
Gene ID: MGYG000000409_12_45
Type: pfam
Location: 48337 - 51216 (+)
Gene ID: MGYG000000409_12_46
Type: TC
Location: 51695 - 52396 (-)
Gene ID: MGYG000000409_12_47
Type: TF
Location: 52775 - 53656 (-)
Gene ID: MGYG000000409_12_48
Type: CAZyme
Location: 54023 - 55093 (+)
Gene ID: MGYG000000409_12_49
Type: pfam
Location: 55106 - 56161 (+)
Gene ID: MGYG000000409_12_50
Type: pfam
Location: 56177 - 57022 (+)
Gene ID: MGYG000000409_12_51
Type: TC
Location: 57041 - 58837 (+)
Gene ID: MGYG000000409_12_52
Type: TC
Location: 58852 - 59727 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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