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Cluster: MGYG000000409_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000000409_10 MGYG000000409_10_55 80059 81678 - GH20
pfam MGYG000000409_10 MGYG000000409_10_56 81698 83260 - ADP_ribosyl_GH
TC MGYG000000409_10 MGYG000000409_10_57 83274 84212 - 3.A.1.1.41
STP MGYG000000409_10 MGYG000000409_10_58 84223 85746 - SBP_bac_1
NULL(UNKNOWN) MGYG000000409_10 MGYG000000409_10_59 85759 87198 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000000409_10 MGYG000000409_10_60 87278 88132 - 3.A.1.1.36
Gene ID: MGYG000000409_10_55
Type: CAZyme
Location: 80059 - 81678 (-)
Gene ID: MGYG000000409_10_56
Type: pfam
Location: 81698 - 83260 (-)
Gene ID: MGYG000000409_10_57
Type: TC
Location: 83274 - 84212 (-)
Gene ID: MGYG000000409_10_58
Type: STP
Location: 84223 - 85746 (-)
Gene ID: MGYG000000409_10_59
Type:
Location: 85759 - 87198 (-)
Gene ID: MGYG000000409_10_60
Type: TC
Location: 87278 - 88132 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000000409_10_55 vegetarian > omnivore 1.86232 0.00089
MGYG000000409_10_55 vegetarian > vegan 2.08136 0.00363
MGYG000000409_10_56 vegetarian > omnivore 1.95299 0.00089
MGYG000000409_10_56 vegetarian > vegan 2.06401 0.00363
MGYG000000409_10_57 vegetarian > omnivore 2.11292 0.00089
MGYG000000409_10_57 vegetarian > vegan 1.37394 0.00363
MGYG000000409_10_58 vegetarian > omnivore 1.80717 0.00089
MGYG000000409_10_59 vegetarian > omnivore 1.90097 0.00089
MGYG000000409_10_60 vegetarian > omnivore 3.00747 0.00089
MGYG000000409_10_60 vegetarian > vegan 1.10200 0.00363

🧭 Explore Read Mapping of CGC

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