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Cluster: MGYG000000408_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000000408_2 MGYG000000408_2_39 40681 41835 - GT28
TC MGYG000000408_2 MGYG000000408_2_40 41810 42979 - 2.A.103.1.3
pfam MGYG000000408_2 MGYG000000408_2_41 42942 44333 - Mur_ligase_C | Mur_ligase_M | MurD-like_N
TC MGYG000000408_2 MGYG000000408_2_42 44345 45319 - 9.B.146.1.3
pfam MGYG000000408_2 MGYG000000408_2_43 45322 46692 - Mur_ligase | Mur_ligase_C | Mur_ligase_M
pfam MGYG000000408_2 MGYG000000408_2_44 46890 48365 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
TC MGYG000000408_2 MGYG000000408_2_45 48376 49428 + 8.A.21.2.4
Gene ID: MGYG000000408_2_39
Type: CAZyme
Location: 40681 - 41835 (-)
Gene ID: MGYG000000408_2_40
Type: TC
Location: 41810 - 42979 (-)
Gene ID: MGYG000000408_2_41
Type: pfam
Location: 42942 - 44333 (-)
Gene ID: MGYG000000408_2_42
Type: TC
Location: 44345 - 45319 (-)
Gene ID: MGYG000000408_2_43
Type: pfam
Location: 45322 - 46692 (-)
Gene ID: MGYG000000408_2_44
Type: pfam
Location: 46890 - 48365 (+)
Gene ID: MGYG000000408_2_45
Type: TC
Location: 48376 - 49428 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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