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Cluster: MGYG000000404_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000404_16 MGYG000000404_16_27 23400 24884 + 1.C.105.2.8
CAZyme MGYG000000404_16 MGYG000000404_16_28 24886 27246 + GT51
pfam MGYG000000404_16 MGYG000000404_16_29 27352 28296 + ROK
TF MGYG000000404_16 MGYG000000404_16_30 28405 28842 + Rrf2
TC MGYG000000404_16 MGYG000000404_16_31 29087 31156 + 2.A.16.2.2
pfam MGYG000000404_16 MGYG000000404_16_32 31217 31762 + Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
STP MGYG000000404_16 MGYG000000404_16_33 32100 32378 + HTH_7
TC MGYG000000404_16 MGYG000000404_16_34 32882 34297 + 2.A.25.1.4
pfam MGYG000000404_16 MGYG000000404_16_35 34339 34719 + 4HBT | FlK
CAZyme MGYG000000404_16 MGYG000000404_16_36 34757 36058 + GH13_20
pfam MGYG000000404_16 MGYG000000404_16_37 36093 36848 + RelA_SpoT
pfam MGYG000000404_16 MGYG000000404_16_38 36962 37225 + DUF6110
TC MGYG000000404_16 MGYG000000404_16_39 37226 39301 + 3.A.3.32.3
TC MGYG000000404_16 MGYG000000404_16_40 39393 40550 + 3.A.11.1.3
pfam MGYG000000404_16 MGYG000000404_16_41 40620 41423 + NYN | OST-HTH
pfam MGYG000000404_16 MGYG000000404_16_42 41496 42050 + DUF308 | DUF308 | DUF308
TC MGYG000000404_16 MGYG000000404_16_43 42133 44046 + 2.A.67.4.2
Gene ID: MGYG000000404_16_27
Type: TC
Location: 23400 - 24884 (+)
Gene ID: MGYG000000404_16_28
Type: CAZyme
Location: 24886 - 27246 (+)
Gene ID: MGYG000000404_16_29
Type: pfam
Location: 27352 - 28296 (+)
Gene ID: MGYG000000404_16_30
Type: TF
Location: 28405 - 28842 (+)
Gene ID: MGYG000000404_16_31
Type: TC
Location: 29087 - 31156 (+)
Gene ID: MGYG000000404_16_32
Type: pfam
Location: 31217 - 31762 (+)
Gene ID: MGYG000000404_16_33
Type: STP
Location: 32100 - 32378 (+)
Gene ID: MGYG000000404_16_34
Type: TC
Location: 32882 - 34297 (+)
Gene ID: MGYG000000404_16_35
Type: pfam
Location: 34339 - 34719 (+)
Gene ID: MGYG000000404_16_36
Type: CAZyme
Location: 34757 - 36058 (+)
Gene ID: MGYG000000404_16_37
Type: pfam
Location: 36093 - 36848 (+)
Gene ID: MGYG000000404_16_38
Type: pfam
Location: 36962 - 37225 (+)
Gene ID: MGYG000000404_16_39
Type: TC
Location: 37226 - 39301 (+)
Gene ID: MGYG000000404_16_40
Type: TC
Location: 39393 - 40550 (+)
Gene ID: MGYG000000404_16_41
Type: pfam
Location: 40620 - 41423 (+)
Gene ID: MGYG000000404_16_42
Type: pfam
Location: 41496 - 42050 (+)
Gene ID: MGYG000000404_16_43
Type: TC
Location: 42133 - 44046 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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