Cluster: MGYG000000404_CGC1
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000000404
- CGC Family ID: CGCFAM_03386
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000404_1 | MGYG000000404_1_124 | 137610 | 138548 | + | GT2 |
| pfam | MGYG000000404_1 | MGYG000000404_1_125 | 138558 | 139082 | + | GtrA_DPMS_TM |
| TC | MGYG000000404_1 | MGYG000000404_1_126 | 139095 | 140480 | + | 9.B.18.1.3 |
| CAZyme | MGYG000000404_1 | MGYG000000404_1_127 | 140492 | 141301 | + | GT2 |
| CAZyme | MGYG000000404_1 | MGYG000000404_1_128 | 141298 | 142389 | + | GT4 |
| CAZyme | MGYG000000404_1 | MGYG000000404_1_129 | 142413 | 143708 | + | GT4 |
| pfam | MGYG000000404_1 | MGYG000000404_1_130 | 143723 | 144964 | + | GT87 |
| TC | MGYG000000404_1 | MGYG000000404_1_131 | 144967 | 145746 | + | 3.A.1.103.4 |
| TC | MGYG000000404_1 | MGYG000000404_1_132 | 145748 | 146992 | + | 3.A.1.103.4 |
| NULL(UNKNOWN) | MGYG000000404_1 | MGYG000000404_1_133 | 146998 | 147384 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000404_1 | MGYG000000404_1_134 | 147381 | 148748 | + | GT4 |
Gene ID: MGYG000000404_1_124
Type: CAZyme
Location: 137610 - 138548 (+)
Type: CAZyme
Location: 137610 - 138548 (+)
Gene ID: MGYG000000404_1_125
Type: pfam
Location: 138558 - 139082 (+)
Type: pfam
Location: 138558 - 139082 (+)
Gene ID: MGYG000000404_1_126
Type: TC
Location: 139095 - 140480 (+)
Type: TC
Location: 139095 - 140480 (+)
Gene ID: MGYG000000404_1_127
Type: CAZyme
Location: 140492 - 141301 (+)
Type: CAZyme
Location: 140492 - 141301 (+)
Gene ID: MGYG000000404_1_128
Type: CAZyme
Location: 141298 - 142389 (+)
Type: CAZyme
Location: 141298 - 142389 (+)
Gene ID: MGYG000000404_1_129
Type: CAZyme
Location: 142413 - 143708 (+)
Type: CAZyme
Location: 142413 - 143708 (+)
Gene ID: MGYG000000404_1_130
Type: pfam
Location: 143723 - 144964 (+)
Type: pfam
Location: 143723 - 144964 (+)
Gene ID: MGYG000000404_1_131
Type: TC
Location: 144967 - 145746 (+)
Type: TC
Location: 144967 - 145746 (+)
Gene ID: MGYG000000404_1_132
Type: TC
Location: 145748 - 146992 (+)
Type: TC
Location: 145748 - 146992 (+)
Gene ID: MGYG000000404_1_133
Type:
Location: 146998 - 147384 (+)
Type:
Location: 146998 - 147384 (+)
Gene ID: MGYG000000404_1_134
Type: CAZyme
Location: 147381 - 148748 (+)
Type: CAZyme
Location: 147381 - 148748 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA11774
Species
UBA11774 sp003507655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000404_1_133 | vegetarian > omnivore | 3.19893 | 0.02199 |
| MGYG000000404_1_133 | vegetarian > vegan | 1.34424 | 0.01743 |