Cluster: MGYG000000396_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000396
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000396_6 | MGYG000000396_6_17 | 14911 | 17238 | - | 9.A.8.1.6 |
| TC | MGYG000000396_6 | MGYG000000396_6_18 | 17362 | 17583 | - | 9.A.8.1.6 |
| STP | MGYG000000396_6 | MGYG000000396_6_19 | 17623 | 17865 | - | FeoA |
| STP | MGYG000000396_6 | MGYG000000396_6_20 | 18100 | 18348 | - | PTS-HPr |
| TC | MGYG000000396_6 | MGYG000000396_6_21 | 18771 | 20234 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | MGYG000000396_6 | MGYG000000396_6_22 | 20388 | 20843 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000396_6 | MGYG000000396_6_23 | 20847 | 23855 | - | GH2 |
Gene ID: MGYG000000396_6_17
Type: TC
Location: 14911 - 17238 (-)
Type: TC
Location: 14911 - 17238 (-)
Gene ID: MGYG000000396_6_18
Type: TC
Location: 17362 - 17583 (-)
Type: TC
Location: 17362 - 17583 (-)
Gene ID: MGYG000000396_6_19
Type: STP
Location: 17623 - 17865 (-)
Type: STP
Location: 17623 - 17865 (-)
Gene ID: MGYG000000396_6_20
Type: STP
Location: 18100 - 18348 (-)
Type: STP
Location: 18100 - 18348 (-)
Gene ID: MGYG000000396_6_21
Type: TC
Location: 18771 - 20234 (-)
Type: TC
Location: 18771 - 20234 (-)
Gene ID: MGYG000000396_6_22
Type:
Location: 20388 - 20843 (-)
Type:
Location: 20388 - 20843 (-)
Gene ID: MGYG000000396_6_23
Type: CAZyme
Location: 20847 - 23855 (-)
Type: CAZyme
Location: 20847 - 23855 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902462065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.