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Cluster: MGYG000000396_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000396_19 MGYG000000396_19_22 22656 24119 + 2.A.3.2.3
TC MGYG000000396_19 MGYG000000396_19_23 24696 27056 + 9.A.8.1.6
TC MGYG000000396_19 MGYG000000396_19_24 27371 29035 + 4.A.1.1.3
TF MGYG000000396_19 MGYG000000396_19_25 29098 29850 - HTH_6
CAZyme MGYG000000396_19 MGYG000000396_19_26 30025 31398 + GH4
NULL(UNKNOWN) MGYG000000396_19 MGYG000000396_19_27 31564 32316 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000000396_19 MGYG000000396_19_28 32492 33688 + 2.A.1.2.18
CAZyme MGYG000000396_19 MGYG000000396_19_29 33843 35219 + GH13_20
Gene ID: MGYG000000396_19_22
Type: TC
Location: 22656 - 24119 (+)
Gene ID: MGYG000000396_19_23
Type: TC
Location: 24696 - 27056 (+)
Gene ID: MGYG000000396_19_24
Type: TC
Location: 27371 - 29035 (+)
Gene ID: MGYG000000396_19_25
Type: TF
Location: 29098 - 29850 (-)
Gene ID: MGYG000000396_19_26
Type: CAZyme
Location: 30025 - 31398 (+)
Gene ID: MGYG000000396_19_27
Type:
Location: 31564 - 32316 (+)
Gene ID: MGYG000000396_19_28
Type: TC
Location: 32492 - 33688 (+)
Gene ID: MGYG000000396_19_29
Type: CAZyme
Location: 33843 - 35219 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000000396_19_22 vegan > omnivore 1.54413 0.01882
MGYG000000396_19_26 vegan > omnivore 1.37102 0.01882
MGYG000000396_19_27 vegan > omnivore 1.64585 0.01882

🧭 Explore Read Mapping of CGC

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