Cluster: MGYG000000392_CGC4
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000392
- CGC Family ID: CGCFAM_04079
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000392_1 | MGYG000000392_1_405 | 449222 | 450691 | - | 9.A.11.1.2 |
| pfam | MGYG000000392_1 | MGYG000000392_1_406 | 450783 | 451460 | + | DUF421 |
| pfam | MGYG000000392_1 | MGYG000000392_1_407 | 451457 | 451837 | + | DUF4363 |
| TC | MGYG000000392_1 | MGYG000000392_1_408 | 451838 | 452677 | - | 3.A.1.15.3 |
| TC | MGYG000000392_1 | MGYG000000392_1_409 | 452674 | 453417 | - | 3.A.1.15.15 |
| TC | MGYG000000392_1 | MGYG000000392_1_410 | 453417 | 454391 | - | 3.A.1.15.3 |
| TC | MGYG000000392_1 | MGYG000000392_1_411 | 454474 | 455493 | - | 2.A.6.4.2 |
| TC | MGYG000000392_1 | MGYG000000392_1_412 | 455483 | 456892 | - | 2.A.6.4.2 |
| STP | MGYG000000392_1 | MGYG000000392_1_413 | 457133 | 458413 | - | Aminotran_1_2 |
| TC | MGYG000000392_1 | MGYG000000392_1_414 | 458596 | 459318 | - | 8.A.3.1.2 |
| pfam | MGYG000000392_1 | MGYG000000392_1_415 | 459324 | 459989 | - | Wzz |
| TC | MGYG000000392_1 | MGYG000000392_1_416 | 460169 | 461407 | - | 3.B.1.1.3 |
| pfam | MGYG000000392_1 | MGYG000000392_1_417 | 461438 | 461878 | - | OAD_gamma |
| CAZyme | MGYG000000392_1 | MGYG000000392_1_418 | 462063 | 463223 | - | GH3 |
Gene ID: MGYG000000392_1_405
Type: TC
Location: 449222 - 450691 (-)
Type: TC
Location: 449222 - 450691 (-)
Gene ID: MGYG000000392_1_406
Type: pfam
Location: 450783 - 451460 (+)
Type: pfam
Location: 450783 - 451460 (+)
Gene ID: MGYG000000392_1_407
Type: pfam
Location: 451457 - 451837 (+)
Type: pfam
Location: 451457 - 451837 (+)
Gene ID: MGYG000000392_1_408
Type: TC
Location: 451838 - 452677 (-)
Type: TC
Location: 451838 - 452677 (-)
Gene ID: MGYG000000392_1_409
Type: TC
Location: 452674 - 453417 (-)
Type: TC
Location: 452674 - 453417 (-)
Gene ID: MGYG000000392_1_410
Type: TC
Location: 453417 - 454391 (-)
Type: TC
Location: 453417 - 454391 (-)
Gene ID: MGYG000000392_1_411
Type: TC
Location: 454474 - 455493 (-)
Type: TC
Location: 454474 - 455493 (-)
Gene ID: MGYG000000392_1_412
Type: TC
Location: 455483 - 456892 (-)
Type: TC
Location: 455483 - 456892 (-)
Gene ID: MGYG000000392_1_413
Type: STP
Location: 457133 - 458413 (-)
Type: STP
Location: 457133 - 458413 (-)
Gene ID: MGYG000000392_1_414
Type: TC
Location: 458596 - 459318 (-)
Type: TC
Location: 458596 - 459318 (-)
Gene ID: MGYG000000392_1_415
Type: pfam
Location: 459324 - 459989 (-)
Type: pfam
Location: 459324 - 459989 (-)
Gene ID: MGYG000000392_1_416
Type: TC
Location: 460169 - 461407 (-)
Type: TC
Location: 460169 - 461407 (-)
Gene ID: MGYG000000392_1_417
Type: pfam
Location: 461438 - 461878 (-)
Type: pfam
Location: 461438 - 461878 (-)
Gene ID: MGYG000000392_1_418
Type: CAZyme
Location: 462063 - 463223 (-)
Type: CAZyme
Location: 462063 - 463223 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp003521625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.