Cluster: MGYG000000392_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000392
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000392_15 | MGYG000000392_15_16 | 17162 | 18040 | - | 3.A.1.1.45 |
| TC | MGYG000000392_15 | MGYG000000392_15_17 | 18040 | 18882 | - | 3.A.1.1.45 |
| TC | MGYG000000392_15 | MGYG000000392_15_18 | 19010 | 20404 | - | 3.A.1.1.45 |
| CAZyme | MGYG000000392_15 | MGYG000000392_15_19 | 20962 | 24549 | + | GH13_19 |
| TC | MGYG000000392_15 | MGYG000000392_15_20 | 24818 | 26461 | + | 4.C.1.1.6 |
Gene ID: MGYG000000392_15_16
Type: TC
Location: 17162 - 18040 (-)
Type: TC
Location: 17162 - 18040 (-)
Gene ID: MGYG000000392_15_17
Type: TC
Location: 18040 - 18882 (-)
Type: TC
Location: 18040 - 18882 (-)
Gene ID: MGYG000000392_15_18
Type: TC
Location: 19010 - 20404 (-)
Type: TC
Location: 19010 - 20404 (-)
Gene ID: MGYG000000392_15_19
Type: CAZyme
Location: 20962 - 24549 (+)
Type: CAZyme
Location: 20962 - 24549 (+)
Gene ID: MGYG000000392_15_20
Type: TC
Location: 24818 - 26461 (+)
Type: TC
Location: 24818 - 26461 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp003521625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.