Cluster: MGYG000000392_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000392
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000392_11 | MGYG000000392_11_14 | 20810 | 23437 | + | 4.A.2.1.17 |
| TF | MGYG000000392_11 | MGYG000000392_11_15 | 23746 | 24528 | - | HTH_3 |
| pfam | MGYG000000392_11 | MGYG000000392_11_16 | 24871 | 25404 | - | PAP2 | PAP2_3 |
| TC | MGYG000000392_11 | MGYG000000392_11_17 | 25528 | 26538 | - | 9.A.11.1.1 |
| pfam | MGYG000000392_11 | MGYG000000392_11_18 | 26602 | 28275 | - | VanW |
| CAZyme | MGYG000000392_11 | MGYG000000392_11_19 | 28654 | 29778 | + | GT28 |
Gene ID: MGYG000000392_11_14
Type: TC
Location: 20810 - 23437 (+)
Type: TC
Location: 20810 - 23437 (+)
Gene ID: MGYG000000392_11_15
Type: TF
Location: 23746 - 24528 (-)
Type: TF
Location: 23746 - 24528 (-)
Gene ID: MGYG000000392_11_16
Type: pfam
Location: 24871 - 25404 (-)
Type: pfam
Location: 24871 - 25404 (-)
Gene ID: MGYG000000392_11_17
Type: TC
Location: 25528 - 26538 (-)
Type: TC
Location: 25528 - 26538 (-)
Gene ID: MGYG000000392_11_18
Type: pfam
Location: 26602 - 28275 (-)
Type: pfam
Location: 26602 - 28275 (-)
Gene ID: MGYG000000392_11_19
Type: CAZyme
Location: 28654 - 29778 (+)
Type: CAZyme
Location: 28654 - 29778 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp003521625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.