Cluster: MGYG000000364_CGC4
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000000364
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000364_1 | MGYG000000364_1_165 | 212343 | 213158 | + | GT2 |
| CAZyme | MGYG000000364_1 | MGYG000000364_1_166 | 213199 | 214230 | + | GT2 |
| TC | MGYG000000364_1 | MGYG000000364_1_167 | 214303 | 215091 | + | 3.A.1.103.4 |
| TC | MGYG000000364_1 | MGYG000000364_1_168 | 215103 | 216416 | + | 3.A.1.103.5 |
| CAZyme | MGYG000000364_1 | MGYG000000364_1_169 | 216493 | 218325 | + | GT2 |
| pfam | MGYG000000364_1 | MGYG000000364_1_170 | 218420 | 219520 | + | GLF | NAD_binding_8 |
| STP | MGYG000000364_1 | MGYG000000364_1_171 | 219699 | 223586 | + | EAL | GGDEF | Peripla_BP_3 |
| TC | MGYG000000364_1 | MGYG000000364_1_172 | 223699 | 225129 | + | 2.A.50.2.1 |
Gene ID: MGYG000000364_1_165
Type: CAZyme
Location: 212343 - 213158 (+)
Type: CAZyme
Location: 212343 - 213158 (+)
Gene ID: MGYG000000364_1_166
Type: CAZyme
Location: 213199 - 214230 (+)
Type: CAZyme
Location: 213199 - 214230 (+)
Gene ID: MGYG000000364_1_167
Type: TC
Location: 214303 - 215091 (+)
Type: TC
Location: 214303 - 215091 (+)
Gene ID: MGYG000000364_1_168
Type: TC
Location: 215103 - 216416 (+)
Type: TC
Location: 215103 - 216416 (+)
Gene ID: MGYG000000364_1_169
Type: CAZyme
Location: 216493 - 218325 (+)
Type: CAZyme
Location: 216493 - 218325 (+)
Gene ID: MGYG000000364_1_170
Type: pfam
Location: 218420 - 219520 (+)
Type: pfam
Location: 218420 - 219520 (+)
Gene ID: MGYG000000364_1_171
Type: STP
Location: 219699 - 223586 (+)
Type: STP
Location: 219699 - 223586 (+)
Gene ID: MGYG000000364_1_172
Type: TC
Location: 223699 - 225129 (+)
Type: TC
Location: 223699 - 225129 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900767685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.