Cluster: MGYG000000364_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000364
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000364_15 | MGYG000000364_15_26 | 30743 | 32368 | - | 3.A.1.121.4 |
| NULL(UNKNOWN) | MGYG000000364_15 | MGYG000000364_15_27 | 32534 | 32716 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000364_15 | MGYG000000364_15_28 | 32914 | 34197 | + | 9.A.40.2.4 |
| TF | MGYG000000364_15 | MGYG000000364_15_29 | 34441 | 35172 | + | 0042546 |
| TF | MGYG000000364_15 | MGYG000000364_15_30 | 35309 | 35638 | - | Trp_repressor |
| CAZyme | MGYG000000364_15 | MGYG000000364_15_31 | 35705 | 37204 | - | GH13_5 |
Gene ID: MGYG000000364_15_26
Type: TC
Location: 30743 - 32368 (-)
Type: TC
Location: 30743 - 32368 (-)
Gene ID: MGYG000000364_15_27
Type:
Location: 32534 - 32716 (-)
Type:
Location: 32534 - 32716 (-)
Gene ID: MGYG000000364_15_28
Type: TC
Location: 32914 - 34197 (+)
Type: TC
Location: 32914 - 34197 (+)
Gene ID: MGYG000000364_15_29
Type: TF
Location: 34441 - 35172 (+)
Type: TF
Location: 34441 - 35172 (+)
Gene ID: MGYG000000364_15_30
Type: TF
Location: 35309 - 35638 (-)
Type: TF
Location: 35309 - 35638 (-)
Gene ID: MGYG000000364_15_31
Type: CAZyme
Location: 35705 - 37204 (-)
Type: CAZyme
Location: 35705 - 37204 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900767685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000364_15_30 | vegan > omnivore | 1.57208 | 0.03094 |