Cluster: MGYG000000364_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000364
- CGC Family ID: CGCFAM_00911
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000364_9 | MGYG000000364_9_80 | 99916 | 102687 | + | GH3 |
| TC | MGYG000000364_9 | MGYG000000364_9_81 | 103204 | 104133 | + | 2.A.4.7.9 |
| TF | MGYG000000364_9 | MGYG000000364_9_82 | 104554 | 105303 | + | HTH_DeoR |
| STP | MGYG000000364_9 | MGYG000000364_9_83 | 105303 | 106205 | + | PfkB |
| TC | MGYG000000364_9 | MGYG000000364_9_84 | 106308 | 108374 | + | 4.A.2.1.4 |
| STP | MGYG000000364_9 | MGYG000000364_9_85 | 108812 | 109075 | + | PTS-HPr |
| TC | MGYG000000364_9 | MGYG000000364_9_86 | 109212 | 110915 | + | 8.A.7.1.1 |
Gene ID: MGYG000000364_9_80
Type: CAZyme
Location: 99916 - 102687 (+)
Type: CAZyme
Location: 99916 - 102687 (+)
Gene ID: MGYG000000364_9_81
Type: TC
Location: 103204 - 104133 (+)
Type: TC
Location: 103204 - 104133 (+)
Gene ID: MGYG000000364_9_82
Type: TF
Location: 104554 - 105303 (+)
Type: TF
Location: 104554 - 105303 (+)
Gene ID: MGYG000000364_9_83
Type: STP
Location: 105303 - 106205 (+)
Type: STP
Location: 105303 - 106205 (+)
Gene ID: MGYG000000364_9_84
Type: TC
Location: 106308 - 108374 (+)
Type: TC
Location: 106308 - 108374 (+)
Gene ID: MGYG000000364_9_85
Type: STP
Location: 108812 - 109075 (+)
Type: STP
Location: 108812 - 109075 (+)
Gene ID: MGYG000000364_9_86
Type: TC
Location: 109212 - 110915 (+)
Type: TC
Location: 109212 - 110915 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900767685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.