Cluster: MGYG000000364_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000364
- CGC Family ID: CGCFAM_02792
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000364_5 | MGYG000000364_5_118 | 148647 | 149234 | + | 3.A.1.25.5 |
| TF | MGYG000000364_5 | MGYG000000364_5_119 | 149441 | 149779 | + | HTH_3 |
| CAZyme | MGYG000000364_5 | MGYG000000364_5_120 | 149831 | 151438 | - | CBM50 |
Gene ID: MGYG000000364_5_118
Type: TC
Location: 148647 - 149234 (+)
Type: TC
Location: 148647 - 149234 (+)
Gene ID: MGYG000000364_5_119
Type: TF
Location: 149441 - 149779 (+)
Type: TF
Location: 149441 - 149779 (+)
Gene ID: MGYG000000364_5_120
Type: CAZyme
Location: 149831 - 151438 (-)
Type: CAZyme
Location: 149831 - 151438 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900767685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000364_5_118 | vegan > omnivore | 1.66416 | 0.01285 |
| MGYG000000364_5_118 | vegetarian > omnivore | 2.58186 | 0.01548 |