Cluster: MGYG000000364_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000364
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000364_4 | MGYG000000364_4_55 | 54846 | 55871 | + | 3.A.1.1.34 |
| TC | MGYG000000364_4 | MGYG000000364_4_56 | 55873 | 56757 | + | 3.A.1.1.47 |
| pfam | MGYG000000364_4 | MGYG000000364_4_57 | 56788 | 57957 | + | GlcNAc_2-epim | Beta-AFase-like_GH127_cat |
| CAZyme | MGYG000000364_4 | MGYG000000364_4_58 | 57999 | 59177 | + | GH130_1 |
| CAZyme | MGYG000000364_4 | MGYG000000364_4_59 | 59307 | 60332 | + | GH130_2 |
Gene ID: MGYG000000364_4_55
Type: TC
Location: 54846 - 55871 (+)
Type: TC
Location: 54846 - 55871 (+)
Gene ID: MGYG000000364_4_56
Type: TC
Location: 55873 - 56757 (+)
Type: TC
Location: 55873 - 56757 (+)
Gene ID: MGYG000000364_4_57
Type: pfam
Location: 56788 - 57957 (+)
Type: pfam
Location: 56788 - 57957 (+)
Gene ID: MGYG000000364_4_58
Type: CAZyme
Location: 57999 - 59177 (+)
Type: CAZyme
Location: 57999 - 59177 (+)
Gene ID: MGYG000000364_4_59
Type: CAZyme
Location: 59307 - 60332 (+)
Type: CAZyme
Location: 59307 - 60332 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900767685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000364_4_56 | vegetarian > vegan | 1.00379 | 0.01601 |
| MGYG000000364_4_58 | vegetarian > vegan | 1.41976 | 0.00566 |