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Cluster: MGYG000000348_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000348_32 MGYG000000348_32_9 6452 7861 + 9.B.14.3.1
NULL(UNKNOWN) MGYG000000348_32 MGYG000000348_32_10 7977 9554 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000000348_32 MGYG000000348_32_11 9761 11362 - GH16_3
NULL(UNKNOWN) MGYG000000348_32 MGYG000000348_32_12 11433 12260 - NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000000348_32 MGYG000000348_32_13 12388 14493 - SusD_RagB | SusD-like_3
TC MGYG000000348_32 MGYG000000348_32_14 14509 17799 - 1.B.14.6.1
STP MGYG000000348_32 MGYG000000348_32_15 18392 22108 + HATPase_c | HisKA | Reg_prop | Response_reg | Y_Y_Y
TF MGYG000000348_32 MGYG000000348_32_16 22114 22515 + HTH_AraC | HTH_AraC
CAZyme MGYG000000348_32 MGYG000000348_32_17 22568 24877 + GH105 | GH154
CAZyme MGYG000000348_32 MGYG000000348_32_18 24949 26541 + CBM32 | GH43_24
Gene ID: MGYG000000348_32_9
Type: TC
Location: 6452 - 7861 (+)
Gene ID: MGYG000000348_32_10
Type:
Location: 7977 - 9554 (-)
Gene ID: MGYG000000348_32_11
Type: CAZyme
Location: 9761 - 11362 (-)
Gene ID: MGYG000000348_32_12
Type:
Location: 11433 - 12260 (-)
Gene ID: MGYG000000348_32_13
Type: pfam
Location: 12388 - 14493 (-)
Gene ID: MGYG000000348_32_14
Type: TC
Location: 14509 - 17799 (-)
Gene ID: MGYG000000348_32_15
Type: STP
Location: 18392 - 22108 (+)
Gene ID: MGYG000000348_32_16
Type: TF
Location: 22114 - 22515 (+)
Gene ID: MGYG000000348_32_17
Type: CAZyme
Location: 22568 - 24877 (+)
Gene ID: MGYG000000348_32_18
Type: CAZyme
Location: 24949 - 26541 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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