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Cluster: MGYG000000348_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000000348_18 MGYG000000348_18_4 1395 2822 - GH13_28
TC MGYG000000348_18 MGYG000000348_18_5 2946 3650 + 3.A.25.1.1
pfam MGYG000000348_18 MGYG000000348_18_6 3662 4423 + DHODB_Fe-S_bind
STP MGYG000000348_18 MGYG000000348_18_7 4420 5928 + Pyr_redox_2
TC MGYG000000348_18 MGYG000000348_18_8 5951 6958 - 1.A.23.2.1
pfam MGYG000000348_18 MGYG000000348_18_9 7029 8486 - TRAM | tRNA_U5-meth_tr | Methyltransf_25 | Methyltransf_31
pfam MGYG000000348_18 MGYG000000348_18_10 8622 9320 + Vut_1
TC MGYG000000348_18 MGYG000000348_18_11 9352 11247 - 3.A.24.1.1
TC MGYG000000348_18 MGYG000000348_18_12 11879 14584 + 3.A.3.2.17
pfam MGYG000000348_18 MGYG000000348_18_13 14696 15457 - CMD
TC MGYG000000348_18 MGYG000000348_18_14 15611 16591 - 2.A.4.7.9
Gene ID: MGYG000000348_18_4
Type: CAZyme
Location: 1395 - 2822 (-)
Gene ID: MGYG000000348_18_5
Type: TC
Location: 2946 - 3650 (+)
Gene ID: MGYG000000348_18_6
Type: pfam
Location: 3662 - 4423 (+)
Gene ID: MGYG000000348_18_7
Type: STP
Location: 4420 - 5928 (+)
Gene ID: MGYG000000348_18_8
Type: TC
Location: 5951 - 6958 (-)
Gene ID: MGYG000000348_18_9
Type: pfam
Location: 7029 - 8486 (-)
Gene ID: MGYG000000348_18_10
Type: pfam
Location: 8622 - 9320 (+)
Gene ID: MGYG000000348_18_11
Type: TC
Location: 9352 - 11247 (-)
Gene ID: MGYG000000348_18_12
Type: TC
Location: 11879 - 14584 (+)
Gene ID: MGYG000000348_18_13
Type: pfam
Location: 14696 - 15457 (-)
Gene ID: MGYG000000348_18_14
Type: TC
Location: 15611 - 16591 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000000348_18_13 vegetarian > omnivore 2.41801 0.02258

🧭 Explore Read Mapping of CGC

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