Cluster: MGYG000000348_CGC14
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000000348
- CGC Family ID: CGCFAM_02949
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000348_15 | MGYG000000348_15_4 | 7560 | 9023 | + | GH125 |
| pfam | MGYG000000348_15 | MGYG000000348_15_5 | 9050 | 10003 | + | Exo_endo_phos |
| CAZyme | MGYG000000348_15 | MGYG000000348_15_6 | 10019 | 10981 | + | GH43_34 |
| CAZyme | MGYG000000348_15 | MGYG000000348_15_7 | 11085 | 11969 | + | GH115 |
| CAZyme | MGYG000000348_15 | MGYG000000348_15_8 | 12002 | 13294 | + | GH115 |
| TC | MGYG000000348_15 | MGYG000000348_15_9 | 13341 | 13700 | + | 1.E.14.1.13 |
| TC | MGYG000000348_15 | MGYG000000348_15_10 | 13705 | 14400 | + | 2.A.122.1.1 |
| TF | MGYG000000348_15 | MGYG000000348_15_11 | 14614 | 16251 | + | 0038753 |
| pfam | MGYG000000348_15 | MGYG000000348_15_12 | 16280 | 17350 | + | Radical_SAM | SPASM |
| TC | MGYG000000348_15 | MGYG000000348_15_13 | 17373 | 18329 | - | 8.A.5.1.6 |
| NULL(UNKNOWN) | MGYG000000348_15 | MGYG000000348_15_14 | 19179 | 19586 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000348_15 | MGYG000000348_15_15 | 19709 | 20704 | + | GH43_17 |
| pfam | MGYG000000348_15 | MGYG000000348_15_16 | 20836 | 22572 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000000348_15 | MGYG000000348_15_17 | 22594 | 25716 | - | 1.B.14.6.1 |
| TF | MGYG000000348_15 | MGYG000000348_15_18 | 25839 | 28586 | - | HTH_AraC |
| CAZyme | MGYG000000348_15 | MGYG000000348_15_19 | 28732 | 30627 | + | GH32 |
| TC | MGYG000000348_15 | MGYG000000348_15_20 | 30649 | 31833 | + | 2.A.1.7.17 |
Gene ID: MGYG000000348_15_4
Type: CAZyme
Location: 7560 - 9023 (+)
Type: CAZyme
Location: 7560 - 9023 (+)
Gene ID: MGYG000000348_15_5
Type: pfam
Location: 9050 - 10003 (+)
Type: pfam
Location: 9050 - 10003 (+)
Gene ID: MGYG000000348_15_6
Type: CAZyme
Location: 10019 - 10981 (+)
Type: CAZyme
Location: 10019 - 10981 (+)
Gene ID: MGYG000000348_15_7
Type: CAZyme
Location: 11085 - 11969 (+)
Type: CAZyme
Location: 11085 - 11969 (+)
Gene ID: MGYG000000348_15_8
Type: CAZyme
Location: 12002 - 13294 (+)
Type: CAZyme
Location: 12002 - 13294 (+)
Gene ID: MGYG000000348_15_9
Type: TC
Location: 13341 - 13700 (+)
Type: TC
Location: 13341 - 13700 (+)
Gene ID: MGYG000000348_15_10
Type: TC
Location: 13705 - 14400 (+)
Type: TC
Location: 13705 - 14400 (+)
Gene ID: MGYG000000348_15_11
Type: TF
Location: 14614 - 16251 (+)
Type: TF
Location: 14614 - 16251 (+)
Gene ID: MGYG000000348_15_12
Type: pfam
Location: 16280 - 17350 (+)
Type: pfam
Location: 16280 - 17350 (+)
Gene ID: MGYG000000348_15_13
Type: TC
Location: 17373 - 18329 (-)
Type: TC
Location: 17373 - 18329 (-)
Gene ID: MGYG000000348_15_14
Type:
Location: 19179 - 19586 (+)
Type:
Location: 19179 - 19586 (+)
Gene ID: MGYG000000348_15_15
Type: CAZyme
Location: 19709 - 20704 (+)
Type: CAZyme
Location: 19709 - 20704 (+)
Gene ID: MGYG000000348_15_16
Type: pfam
Location: 20836 - 22572 (-)
Type: pfam
Location: 20836 - 22572 (-)
Gene ID: MGYG000000348_15_17
Type: TC
Location: 22594 - 25716 (-)
Type: TC
Location: 22594 - 25716 (-)
Gene ID: MGYG000000348_15_18
Type: TF
Location: 25839 - 28586 (-)
Type: TF
Location: 25839 - 28586 (-)
Gene ID: MGYG000000348_15_19
Type: CAZyme
Location: 28732 - 30627 (+)
Type: CAZyme
Location: 28732 - 30627 (+)
Gene ID: MGYG000000348_15_20
Type: TC
Location: 30649 - 31833 (+)
Type: TC
Location: 30649 - 31833 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp905198125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.