Cluster: MGYG000000343_CGC45
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: MGYG000000343
- CGC Family ID: CGCFAM_00111
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000343_38 | MGYG000000343_38_1 | 281 | 2350 | - | GH20 |
| CAZyme | MGYG000000343_38 | MGYG000000343_38_2 | 2368 | 4836 | - | GH20 |
| TF | MGYG000000343_38 | MGYG000000343_38_3 | 4923 | 5471 | + | GerE |
| STP | MGYG000000343_38 | MGYG000000343_38_4 | 5562 | 6722 | + | FecR |
| TC | MGYG000000343_38 | MGYG000000343_38_5 | 6935 | 10351 | + | 1.B.14.6.1 |
| TC | MGYG000000343_38 | MGYG000000343_38_6 | 10358 | 11884 | + | 8.A.46.3.3 |
Gene ID: MGYG000000343_38_1
Type: CAZyme
Location: 281 - 2350 (-)
Type: CAZyme
Location: 281 - 2350 (-)
Gene ID: MGYG000000343_38_2
Type: CAZyme
Location: 2368 - 4836 (-)
Type: CAZyme
Location: 2368 - 4836 (-)
Gene ID: MGYG000000343_38_3
Type: TF
Location: 4923 - 5471 (+)
Type: TF
Location: 4923 - 5471 (+)
Gene ID: MGYG000000343_38_4
Type: STP
Location: 5562 - 6722 (+)
Type: STP
Location: 5562 - 6722 (+)
Gene ID: MGYG000000343_38_5
Type: TC
Location: 6935 - 10351 (+)
Type: TC
Location: 6935 - 10351 (+)
Gene ID: MGYG000000343_38_6
Type: TC
Location: 10358 - 11884 (+)
Type: TC
Location: 10358 - 11884 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Species
Odoribacter sp900548135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000343_38_3 | vegetarian > omnivore | 2.14257 | 0.00749 |
| MGYG000000343_38_4 | vegetarian > omnivore | 1.85642 | 0.00749 |
| MGYG000000343_38_5 | vegetarian > omnivore | 1.49067 | 0.00749 |
| MGYG000000343_38_6 | vegan > omnivore | 1.98699 | 0.02173 |
| MGYG000000343_38_6 | vegetarian > omnivore | 1.83830 | 0.00749 |