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Cluster: MGYG000000343_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000343_26 MGYG000000343_26_35 39970 42111 + 2.A.37.2.5
TC MGYG000000343_26 MGYG000000343_26_36 42493 44859 + 9.A.8.1.6
NULL(UNKNOWN) MGYG000000343_26 MGYG000000343_26_37 44899 45114 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) MGYG000000343_26 MGYG000000343_26_38 45111 45857 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000000343_26 MGYG000000343_26_39 45959 47347 - GH23
TC MGYG000000343_26 MGYG000000343_26_40 47422 49401 - 1.B.14.15.1
pfam MGYG000000343_26 MGYG000000343_26_41 49521 51230 + tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2
TC MGYG000000343_26 MGYG000000343_26_42 51317 52189 + 2.A.115.1.1
Gene ID: MGYG000000343_26_35
Type: TC
Location: 39970 - 42111 (+)
Gene ID: MGYG000000343_26_36
Type: TC
Location: 42493 - 44859 (+)
Gene ID: MGYG000000343_26_37
Type:
Location: 44899 - 45114 (+)
Gene ID: MGYG000000343_26_38
Type:
Location: 45111 - 45857 (-)
Gene ID: MGYG000000343_26_39
Type: CAZyme
Location: 45959 - 47347 (-)
Gene ID: MGYG000000343_26_40
Type: TC
Location: 47422 - 49401 (-)
Gene ID: MGYG000000343_26_41
Type: pfam
Location: 49521 - 51230 (+)
Gene ID: MGYG000000343_26_42
Type: TC
Location: 51317 - 52189 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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