Cluster: MGYG000000330_CGC5
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000330
- CGC Family ID: CGCFAM_01226
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000330_2 | MGYG000000330_2_202 | 211695 | 212075 | + | 2.A.88.1.1 |
| NULL(UNKNOWN) | MGYG000000330_2 | MGYG000000330_2_203 | 212312 | 213115 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000330_2 | MGYG000000330_2_204 | 213269 | 214630 | - | 2.A.8.1.1 |
| pfam | MGYG000000330_2 | MGYG000000330_2_205 | 214670 | 216232 | - | FGGY_N | FGGY_C |
| TF | MGYG000000330_2 | MGYG000000330_2_206 | 216531 | 217376 | + | HTH_6 |
| CAZyme | MGYG000000330_2 | MGYG000000330_2_207 | 217411 | 218169 | + | GH25 |
| pfam | MGYG000000330_2 | MGYG000000330_2_208 | 218248 | 218616 | - | DUF4828 |
| pfam | MGYG000000330_2 | MGYG000000330_2_209 | 218742 | 219743 | + | GFO_IDH_MocA | GFO_IDH_MocA_C3 |
| TC | MGYG000000330_2 | MGYG000000330_2_210 | 219765 | 221054 | + | 3.A.18.1.1 |
| TC | MGYG000000330_2 | MGYG000000330_2_211 | 221398 | 222237 | + | 3.A.1.3.14 |
| TC | MGYG000000330_2 | MGYG000000330_2_212 | 222246 | 222917 | + | 3.A.1.3.14 |
| NULL(UNKNOWN) | MGYG000000330_2 | MGYG000000330_2_213 | 223015 | 223158 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000000330_2 | MGYG000000330_2_214 | 223164 | 223619 | - | GtrA_DPMS_TM |
| CAZyme | MGYG000000330_2 | MGYG000000330_2_215 | 223619 | 224566 | - | GT2 |
| pfam | MGYG000000330_2 | MGYG000000330_2_216 | 224850 | 225974 | + | Epimerase_2 |
| TC | MGYG000000330_2 | MGYG000000330_2_217 | 225994 | 226929 | + | 9.B.126.2.5 |
Gene ID: MGYG000000330_2_202
Type: TC
Location: 211695 - 212075 (+)
Type: TC
Location: 211695 - 212075 (+)
Gene ID: MGYG000000330_2_203
Type:
Location: 212312 - 213115 (-)
Type:
Location: 212312 - 213115 (-)
Gene ID: MGYG000000330_2_204
Type: TC
Location: 213269 - 214630 (-)
Type: TC
Location: 213269 - 214630 (-)
Gene ID: MGYG000000330_2_205
Type: pfam
Location: 214670 - 216232 (-)
Type: pfam
Location: 214670 - 216232 (-)
Gene ID: MGYG000000330_2_206
Type: TF
Location: 216531 - 217376 (+)
Type: TF
Location: 216531 - 217376 (+)
Gene ID: MGYG000000330_2_207
Type: CAZyme
Location: 217411 - 218169 (+)
Type: CAZyme
Location: 217411 - 218169 (+)
Gene ID: MGYG000000330_2_208
Type: pfam
Location: 218248 - 218616 (-)
Type: pfam
Location: 218248 - 218616 (-)
Gene ID: MGYG000000330_2_209
Type: pfam
Location: 218742 - 219743 (+)
Type: pfam
Location: 218742 - 219743 (+)
Gene ID: MGYG000000330_2_210
Type: TC
Location: 219765 - 221054 (+)
Type: TC
Location: 219765 - 221054 (+)
Gene ID: MGYG000000330_2_211
Type: TC
Location: 221398 - 222237 (+)
Type: TC
Location: 221398 - 222237 (+)
Gene ID: MGYG000000330_2_212
Type: TC
Location: 222246 - 222917 (+)
Type: TC
Location: 222246 - 222917 (+)
Gene ID: MGYG000000330_2_213
Type:
Location: 223015 - 223158 (-)
Type:
Location: 223015 - 223158 (-)
Gene ID: MGYG000000330_2_214
Type: pfam
Location: 223164 - 223619 (-)
Type: pfam
Location: 223164 - 223619 (-)
Gene ID: MGYG000000330_2_215
Type: CAZyme
Location: 223619 - 224566 (-)
Type: CAZyme
Location: 223619 - 224566 (-)
Gene ID: MGYG000000330_2_216
Type: pfam
Location: 224850 - 225974 (+)
Type: pfam
Location: 224850 - 225974 (+)
Gene ID: MGYG000000330_2_217
Type: TC
Location: 225994 - 226929 (+)
Type: TC
Location: 225994 - 226929 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lentilactobacillus
Species
Lentilactobacillus parabuchneri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.