Cluster: MGYG000000330_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000330
- CGC Family ID: CGCFAM_08544
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000330_2 | MGYG000000330_2_22 | 25403 | 27214 | + | GH2 |
| TC | MGYG000000330_2 | MGYG000000330_2_23 | 27396 | 28607 | + | 3.D.2.2.1 |
| TC | MGYG000000330_2 | MGYG000000330_2_24 | 28610 | 28927 | + | 3.D.2.2.2 |
| TC | MGYG000000330_2 | MGYG000000330_2_25 | 28927 | 30345 | + | 3.D.2.2.1 |
| pfam | MGYG000000330_2 | MGYG000000330_2_26 | 30424 | 31662 | - | MucBP | DUF5776 | DUF5776 |
| pfam | MGYG000000330_2 | MGYG000000330_2_27 | 31755 | 32537 | - | LRR_4 | LRR_4 |
| TC | MGYG000000330_2 | MGYG000000330_2_28 | 32749 | 33888 | + | 2.A.37.2.1 |
Gene ID: MGYG000000330_2_22
Type: CAZyme
Location: 25403 - 27214 (+)
Type: CAZyme
Location: 25403 - 27214 (+)
Gene ID: MGYG000000330_2_23
Type: TC
Location: 27396 - 28607 (+)
Type: TC
Location: 27396 - 28607 (+)
Gene ID: MGYG000000330_2_24
Type: TC
Location: 28610 - 28927 (+)
Type: TC
Location: 28610 - 28927 (+)
Gene ID: MGYG000000330_2_25
Type: TC
Location: 28927 - 30345 (+)
Type: TC
Location: 28927 - 30345 (+)
Gene ID: MGYG000000330_2_26
Type: pfam
Location: 30424 - 31662 (-)
Type: pfam
Location: 30424 - 31662 (-)
Gene ID: MGYG000000330_2_27
Type: pfam
Location: 31755 - 32537 (-)
Type: pfam
Location: 31755 - 32537 (-)
Gene ID: MGYG000000330_2_28
Type: TC
Location: 32749 - 33888 (+)
Type: TC
Location: 32749 - 33888 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lentilactobacillus
Species
Lentilactobacillus parabuchneri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.