Cluster: MGYG000000330_CGC18
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000000330
- CGC Family ID: CGCFAM_08546
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000330_9 | MGYG000000330_9_41 | 48562 | 49452 | - | CE4 |
| NULL(UNKNOWN) | MGYG000000330_9 | MGYG000000330_9_42 | 49433 | 49750 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000330_9 | MGYG000000330_9_43 | 49753 | 50967 | - | GT2 |
| CAZyme | MGYG000000330_9 | MGYG000000330_9_44 | 50992 | 52131 | - | GH20 |
| pfam | MGYG000000330_9 | MGYG000000330_9_45 | 52403 | 53179 | - | ABC2_membrane_2 | ABC2_membrane_4 |
| TC | MGYG000000330_9 | MGYG000000330_9_46 | 53181 | 54092 | - | 3.A.1.124.3 |
| peptidase | MGYG000000330_9 | MGYG000000330_9_47 | 54299 | 54985 | + | C56.UNW |
| TC | MGYG000000330_9 | MGYG000000330_9_48 | 55109 | 56494 | - | 2.A.1.1.116 |
| pfam | MGYG000000330_9 | MGYG000000330_9_49 | 56903 | 57613 | - | AAL_decarboxy |
| pfam | MGYG000000330_9 | MGYG000000330_9_50 | 57774 | 58454 | + | Hydrolase | HAD | Hydrolase_like | HAD_2 |
| TC | MGYG000000330_9 | MGYG000000330_9_51 | 58629 | 59966 | + | 2.A.1.6.3 |
| pfam | MGYG000000330_9 | MGYG000000330_9_52 | 60058 | 60537 | + | Ferritin |
| TC | MGYG000000330_9 | MGYG000000330_9_53 | 60626 | 61534 | + | 8.A.5.1.4 |
| TC | MGYG000000330_9 | MGYG000000330_9_54 | 61678 | 62676 | - | 3.D.10.1.4 |
Gene ID: MGYG000000330_9_41
Type: CAZyme
Location: 48562 - 49452 (-)
Type: CAZyme
Location: 48562 - 49452 (-)
Gene ID: MGYG000000330_9_42
Type:
Location: 49433 - 49750 (-)
Type:
Location: 49433 - 49750 (-)
Gene ID: MGYG000000330_9_43
Type: CAZyme
Location: 49753 - 50967 (-)
Type: CAZyme
Location: 49753 - 50967 (-)
Gene ID: MGYG000000330_9_44
Type: CAZyme
Location: 50992 - 52131 (-)
Type: CAZyme
Location: 50992 - 52131 (-)
Gene ID: MGYG000000330_9_45
Type: pfam
Location: 52403 - 53179 (-)
Type: pfam
Location: 52403 - 53179 (-)
Gene ID: MGYG000000330_9_46
Type: TC
Location: 53181 - 54092 (-)
Type: TC
Location: 53181 - 54092 (-)
Gene ID: MGYG000000330_9_47
Type: peptidase
Location: 54299 - 54985 (+)
Type: peptidase
Location: 54299 - 54985 (+)
Gene ID: MGYG000000330_9_48
Type: TC
Location: 55109 - 56494 (-)
Type: TC
Location: 55109 - 56494 (-)
Gene ID: MGYG000000330_9_49
Type: pfam
Location: 56903 - 57613 (-)
Type: pfam
Location: 56903 - 57613 (-)
Gene ID: MGYG000000330_9_50
Type: pfam
Location: 57774 - 58454 (+)
Type: pfam
Location: 57774 - 58454 (+)
Gene ID: MGYG000000330_9_51
Type: TC
Location: 58629 - 59966 (+)
Type: TC
Location: 58629 - 59966 (+)
Gene ID: MGYG000000330_9_52
Type: pfam
Location: 60058 - 60537 (+)
Type: pfam
Location: 60058 - 60537 (+)
Gene ID: MGYG000000330_9_53
Type: TC
Location: 60626 - 61534 (+)
Type: TC
Location: 60626 - 61534 (+)
Gene ID: MGYG000000330_9_54
Type: TC
Location: 61678 - 62676 (-)
Type: TC
Location: 61678 - 62676 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lentilactobacillus
Species
Lentilactobacillus parabuchneri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.