Cluster: MGYG000000330_CGC17
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000000330
- CGC Family ID: CGCFAM_08545
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000330_9 | MGYG000000330_9_5 | 4288 | 5205 | + | 2.A.7.3.31 |
| peptidase | MGYG000000330_9 | MGYG000000330_9_6 | 5303 | 6019 | - | C26.A28 |
| TC | MGYG000000330_9 | MGYG000000330_9_7 | 6036 | 7661 | - | 3.A.1.5.19 |
| pfam | MGYG000000330_9 | MGYG000000330_9_8 | 8097 | 8537 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| pfam | MGYG000000330_9 | MGYG000000330_9_9 | 8662 | 9237 | + | Lysine_decarbox | LDcluster4 |
| CAZyme | MGYG000000330_9 | MGYG000000330_9_10 | 9323 | 11875 | - | GH59 |
| CAZyme | MGYG000000330_9 | MGYG000000330_9_11 | 11995 | 13806 | - | GH2 |
| TF | MGYG000000330_9 | MGYG000000330_9_12 | 14134 | 15156 | - | LacI |
| CAZyme | MGYG000000330_9 | MGYG000000330_9_13 | 15475 | 16611 | + | GH25 |
| STP | MGYG000000330_9 | MGYG000000330_9_14 | 16851 | 17507 | - | TetR_N |
| NULL(UNKNOWN) | MGYG000000330_9 | MGYG000000330_9_15 | 17638 | 17910 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000330_9 | MGYG000000330_9_16 | 18156 | 19061 | - | 3.A.1.15.13 |
| pfam | MGYG000000330_9 | MGYG000000330_9_17 | 19161 | 19847 | - | Amidase_2 |
| pfam | MGYG000000330_9 | MGYG000000330_9_18 | 20031 | 20645 | + | Isochorismatase |
| TC | MGYG000000330_9 | MGYG000000330_9_19 | 20922 | 22325 | - | 2.A.26.1.9 |
Gene ID: MGYG000000330_9_5
Type: TC
Location: 4288 - 5205 (+)
Type: TC
Location: 4288 - 5205 (+)
Gene ID: MGYG000000330_9_6
Type: peptidase
Location: 5303 - 6019 (-)
Type: peptidase
Location: 5303 - 6019 (-)
Gene ID: MGYG000000330_9_7
Type: TC
Location: 6036 - 7661 (-)
Type: TC
Location: 6036 - 7661 (-)
Gene ID: MGYG000000330_9_8
Type: pfam
Location: 8097 - 8537 (-)
Type: pfam
Location: 8097 - 8537 (-)
Gene ID: MGYG000000330_9_9
Type: pfam
Location: 8662 - 9237 (+)
Type: pfam
Location: 8662 - 9237 (+)
Gene ID: MGYG000000330_9_10
Type: CAZyme
Location: 9323 - 11875 (-)
Type: CAZyme
Location: 9323 - 11875 (-)
Gene ID: MGYG000000330_9_11
Type: CAZyme
Location: 11995 - 13806 (-)
Type: CAZyme
Location: 11995 - 13806 (-)
Gene ID: MGYG000000330_9_12
Type: TF
Location: 14134 - 15156 (-)
Type: TF
Location: 14134 - 15156 (-)
Gene ID: MGYG000000330_9_13
Type: CAZyme
Location: 15475 - 16611 (+)
Type: CAZyme
Location: 15475 - 16611 (+)
Gene ID: MGYG000000330_9_14
Type: STP
Location: 16851 - 17507 (-)
Type: STP
Location: 16851 - 17507 (-)
Gene ID: MGYG000000330_9_15
Type:
Location: 17638 - 17910 (-)
Type:
Location: 17638 - 17910 (-)
Gene ID: MGYG000000330_9_16
Type: TC
Location: 18156 - 19061 (-)
Type: TC
Location: 18156 - 19061 (-)
Gene ID: MGYG000000330_9_17
Type: pfam
Location: 19161 - 19847 (-)
Type: pfam
Location: 19161 - 19847 (-)
Gene ID: MGYG000000330_9_18
Type: pfam
Location: 20031 - 20645 (+)
Type: pfam
Location: 20031 - 20645 (+)
Gene ID: MGYG000000330_9_19
Type: TC
Location: 20922 - 22325 (-)
Type: TC
Location: 20922 - 22325 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lentilactobacillus
Species
Lentilactobacillus parabuchneri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.