Cluster: MGYG000000326_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000326
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000326_3 | MGYG000000326_3_8 | 6025 | 7137 | + | 3.A.1.1.23 |
| TF | MGYG000000326_3 | MGYG000000326_3_9 | 7206 | 8423 | - | MarR |
| STP | MGYG000000326_3 | MGYG000000326_3_10 | 8543 | 9823 | + | SBP_bac_1 |
| TC | MGYG000000326_3 | MGYG000000326_3_11 | 9848 | 10744 | + | 3.A.1.1.28 |
| TC | MGYG000000326_3 | MGYG000000326_3_12 | 10744 | 11640 | + | 3.A.1.1.42 |
| CAZyme | MGYG000000326_3 | MGYG000000326_3_13 | 11672 | 13357 | + | GH13_30 |
Gene ID: MGYG000000326_3_8
Type: TC
Location: 6025 - 7137 (+)
Type: TC
Location: 6025 - 7137 (+)
Gene ID: MGYG000000326_3_9
Type: TF
Location: 7206 - 8423 (-)
Type: TF
Location: 7206 - 8423 (-)
Gene ID: MGYG000000326_3_10
Type: STP
Location: 8543 - 9823 (+)
Type: STP
Location: 8543 - 9823 (+)
Gene ID: MGYG000000326_3_11
Type: TC
Location: 9848 - 10744 (+)
Type: TC
Location: 9848 - 10744 (+)
Gene ID: MGYG000000326_3_12
Type: TC
Location: 10744 - 11640 (+)
Type: TC
Location: 10744 - 11640 (+)
Gene ID: MGYG000000326_3_13
Type: CAZyme
Location: 11672 - 13357 (+)
Type: CAZyme
Location: 11672 - 13357 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Rothia
Species
Rothia terrae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.