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Cluster: MGYG000000326_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000326_1 MGYG000000326_1_75 79684 80589 - 2.A.1.6.6
CAZyme MGYG000000326_1 MGYG000000326_1_76 80766 81767 - GT2
CAZyme MGYG000000326_1 MGYG000000326_1_77 81829 82809 + GT2
NULL(UNKNOWN) MGYG000000326_1 MGYG000000326_1_78 83074 84402 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000000326_1 MGYG000000326_1_79 84533 85408 - GT2
pfam MGYG000000326_1 MGYG000000326_1_80 85442 85846 - DUF2304
CAZyme MGYG000000326_1 MGYG000000326_1_81 85846 86583 - GT2
pfam MGYG000000326_1 MGYG000000326_1_82 86733 88763 - DUF6541
TC MGYG000000326_1 MGYG000000326_1_83 88936 90339 - 2.A.8.1.7
Gene ID: MGYG000000326_1_75
Type: TC
Location: 79684 - 80589 (-)
Gene ID: MGYG000000326_1_76
Type: CAZyme
Location: 80766 - 81767 (-)
Gene ID: MGYG000000326_1_77
Type: CAZyme
Location: 81829 - 82809 (+)
Gene ID: MGYG000000326_1_78
Type:
Location: 83074 - 84402 (-)
Gene ID: MGYG000000326_1_79
Type: CAZyme
Location: 84533 - 85408 (-)
Gene ID: MGYG000000326_1_80
Type: pfam
Location: 85442 - 85846 (-)
Gene ID: MGYG000000326_1_81
Type: CAZyme
Location: 85846 - 86583 (-)
Gene ID: MGYG000000326_1_82
Type: pfam
Location: 86733 - 88763 (-)
Gene ID: MGYG000000326_1_83
Type: TC
Location: 88936 - 90339 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Actinomycetota
→
Class
Actinomycetes
→
Order
Actinomycetales
→
Family
Micrococcaceae
→
Genus
Rothia
→
Species
Rothia terrae

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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