Cluster: MGYG000000326_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000326
- CGC Family ID: CGCFAM_00248
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000326_60 | MGYG000000326_60_1 | 16 | 816 | - | GH32 |
| CAZyme | MGYG000000326_60 | MGYG000000326_60_2 | 924 | 2426 | - | GH32 |
| pfam | MGYG000000326_60 | MGYG000000326_60_3 | 2735 | 3109 | - | Ribosomal_L12 | Ribosomal_L12_N |
| pfam | MGYG000000326_60 | MGYG000000326_60_4 | 3218 | 3754 | - | Ribosomal_L10 |
| TC | MGYG000000326_60 | MGYG000000326_60_5 | 4378 | 5073 | - | 1.C.82.1.1 |
Gene ID: MGYG000000326_60_1
Type: CAZyme
Location: 16 - 816 (-)
Type: CAZyme
Location: 16 - 816 (-)
Gene ID: MGYG000000326_60_2
Type: CAZyme
Location: 924 - 2426 (-)
Type: CAZyme
Location: 924 - 2426 (-)
Gene ID: MGYG000000326_60_3
Type: pfam
Location: 2735 - 3109 (-)
Type: pfam
Location: 2735 - 3109 (-)
Gene ID: MGYG000000326_60_4
Type: pfam
Location: 3218 - 3754 (-)
Type: pfam
Location: 3218 - 3754 (-)
Gene ID: MGYG000000326_60_5
Type: TC
Location: 4378 - 5073 (-)
Type: TC
Location: 4378 - 5073 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Rothia
Species
Rothia terrae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.