Cluster: MGYG000000319_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000319
- CGC Family ID: CGCFAM_00047
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000319_114 | MGYG000000319_114_1 | 203 | 1564 | - | GH1 |
| CAZyme | MGYG000000319_114 | MGYG000000319_114_2 | 1623 | 4055 | - | GH94 |
| TF | MGYG000000319_114 | MGYG000000319_114_3 | 4652 | 5659 | + | LacI |
| NULL(UNKNOWN) | MGYG000000319_114 | MGYG000000319_114_4 | 5729 | 7123 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000319_114 | MGYG000000319_114_5 | 7219 | 7779 | + | 3.A.1.1.4 |
Gene ID: MGYG000000319_114_1
Type: CAZyme
Location: 203 - 1564 (-)
Type: CAZyme
Location: 203 - 1564 (-)
Gene ID: MGYG000000319_114_2
Type: CAZyme
Location: 1623 - 4055 (-)
Type: CAZyme
Location: 1623 - 4055 (-)
Gene ID: MGYG000000319_114_3
Type: TF
Location: 4652 - 5659 (+)
Type: TF
Location: 4652 - 5659 (+)
Gene ID: MGYG000000319_114_4
Type:
Location: 5729 - 7123 (+)
Type:
Location: 5729 - 7123 (+)
Gene ID: MGYG000000319_114_5
Type: TC
Location: 7219 - 7779 (+)
Type: TC
Location: 7219 - 7779 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Pygmaiobacter
Species
Pygmaiobacter massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.