Cluster: MGYG000000312_CGC8
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000000312
- CGC Family ID: CGCFAM_00009
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000312_3 | MGYG000000312_3_104 | 120947 | 121939 | + | 3.A.1.104.1 |
| TC | MGYG000000312_3 | MGYG000000312_3_105 | 122123 | 123493 | + | 3.A.1.103.6 |
| pfam | MGYG000000312_3 | MGYG000000312_3_106 | 123497 | 125644 | + | PCMT | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | MGYG000000312_3 | MGYG000000312_3_107 | 125629 | 127629 | + | GT2 |
| CAZyme | MGYG000000312_3 | MGYG000000312_3_108 | 127643 | 129619 | + | GT2 | GT2 |
| pfam | MGYG000000312_3 | MGYG000000312_3_109 | 129696 | 131417 | + | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | MGYG000000312_3 | MGYG000000312_3_110 | 131545 | 132963 | + | GT2 |
| CAZyme | MGYG000000312_3 | MGYG000000312_3_111 | 132911 | 133888 | + | GT2 |
| TC | MGYG000000312_3 | MGYG000000312_3_112 | 134066 | 135484 | + | 9.B.18.1.1 |
| pfam | MGYG000000312_3 | MGYG000000312_3_113 | 135510 | 136658 | + | LytR_cpsA_psr |
| CAZyme | MGYG000000312_3 | MGYG000000312_3_114 | 136665 | 137630 | + | GT2 |
Gene ID: MGYG000000312_3_104
Type: TC
Location: 120947 - 121939 (+)
Type: TC
Location: 120947 - 121939 (+)
Gene ID: MGYG000000312_3_105
Type: TC
Location: 122123 - 123493 (+)
Type: TC
Location: 122123 - 123493 (+)
Gene ID: MGYG000000312_3_106
Type: pfam
Location: 123497 - 125644 (+)
Type: pfam
Location: 123497 - 125644 (+)
Gene ID: MGYG000000312_3_107
Type: CAZyme
Location: 125629 - 127629 (+)
Type: CAZyme
Location: 125629 - 127629 (+)
Gene ID: MGYG000000312_3_108
Type: CAZyme
Location: 127643 - 129619 (+)
Type: CAZyme
Location: 127643 - 129619 (+)
Gene ID: MGYG000000312_3_109
Type: pfam
Location: 129696 - 131417 (+)
Type: pfam
Location: 129696 - 131417 (+)
Gene ID: MGYG000000312_3_110
Type: CAZyme
Location: 131545 - 132963 (+)
Type: CAZyme
Location: 131545 - 132963 (+)
Gene ID: MGYG000000312_3_111
Type: CAZyme
Location: 132911 - 133888 (+)
Type: CAZyme
Location: 132911 - 133888 (+)
Gene ID: MGYG000000312_3_112
Type: TC
Location: 134066 - 135484 (+)
Type: TC
Location: 134066 - 135484 (+)
Gene ID: MGYG000000312_3_113
Type: pfam
Location: 135510 - 136658 (+)
Type: pfam
Location: 135510 - 136658 (+)
Gene ID: MGYG000000312_3_114
Type: CAZyme
Location: 136665 - 137630 (+)
Type: CAZyme
Location: 136665 - 137630 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.