Cluster: MGYG000000312_CGC6
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 9
- Substrate:
- Genome ID: MGYG000000312
- CGC Family ID: CGCFAM_00287
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000312_3 | MGYG000000312_3_51 | 58770 | 59897 | + | GT4 |
| CAZyme | MGYG000000312_3 | MGYG000000312_3_52 | 59902 | 60921 | + | GT2 |
| CAZyme | MGYG000000312_3 | MGYG000000312_3_53 | 60959 | 61978 | + | GT2 |
| pfam | MGYG000000312_3 | MGYG000000312_3_54 | 61985 | 63163 | + | PS_pyruv_trans |
| CAZyme | MGYG000000312_3 | MGYG000000312_3_55 | 63192 | 64394 | + | GH105 |
| TC | MGYG000000312_3 | MGYG000000312_3_56 | 64382 | 65902 | + | 2.A.66.1.40 |
| CAZyme | MGYG000000312_3 | MGYG000000312_3_57 | 65995 | 66906 | + | GT11 |
| CAZyme | MGYG000000312_3 | MGYG000000312_3_58 | 67735 | 68442 | + | GT2 |
| pfam | MGYG000000312_3 | MGYG000000312_3_59 | 68445 | 68819 | + | DUF2304 |
| CAZyme | MGYG000000312_3 | MGYG000000312_3_60 | 68812 | 69606 | + | GT2 |
| CAZyme | MGYG000000312_3 | MGYG000000312_3_61 | 69603 | 70601 | + | GT2 |
| CAZyme | MGYG000000312_3 | MGYG000000312_3_62 | 70618 | 71358 | + | GT2 |
| NULL(UNKNOWN) | MGYG000000312_3 | MGYG000000312_3_63 | 71385 | 72455 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000000312_3 | MGYG000000312_3_64 | 72688 | 74235 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000312_3 | MGYG000000312_3_65 | 74232 | 75677 | + | 2.A.66.2.2 |
| pfam | MGYG000000312_3 | MGYG000000312_3_66 | 75724 | 76170 | + | CTP_transf_like |
| TC | MGYG000000312_3 | MGYG000000312_3_67 | 76181 | 77188 | + | 9.B.97.6.2 |
Gene ID: MGYG000000312_3_51
Type: CAZyme
Location: 58770 - 59897 (+)
Type: CAZyme
Location: 58770 - 59897 (+)
Gene ID: MGYG000000312_3_52
Type: CAZyme
Location: 59902 - 60921 (+)
Type: CAZyme
Location: 59902 - 60921 (+)
Gene ID: MGYG000000312_3_53
Type: CAZyme
Location: 60959 - 61978 (+)
Type: CAZyme
Location: 60959 - 61978 (+)
Gene ID: MGYG000000312_3_54
Type: pfam
Location: 61985 - 63163 (+)
Type: pfam
Location: 61985 - 63163 (+)
Gene ID: MGYG000000312_3_55
Type: CAZyme
Location: 63192 - 64394 (+)
Type: CAZyme
Location: 63192 - 64394 (+)
Gene ID: MGYG000000312_3_56
Type: TC
Location: 64382 - 65902 (+)
Type: TC
Location: 64382 - 65902 (+)
Gene ID: MGYG000000312_3_57
Type: CAZyme
Location: 65995 - 66906 (+)
Type: CAZyme
Location: 65995 - 66906 (+)
Gene ID: MGYG000000312_3_58
Type: CAZyme
Location: 67735 - 68442 (+)
Type: CAZyme
Location: 67735 - 68442 (+)
Gene ID: MGYG000000312_3_59
Type: pfam
Location: 68445 - 68819 (+)
Type: pfam
Location: 68445 - 68819 (+)
Gene ID: MGYG000000312_3_60
Type: CAZyme
Location: 68812 - 69606 (+)
Type: CAZyme
Location: 68812 - 69606 (+)
Gene ID: MGYG000000312_3_61
Type: CAZyme
Location: 69603 - 70601 (+)
Type: CAZyme
Location: 69603 - 70601 (+)
Gene ID: MGYG000000312_3_62
Type: CAZyme
Location: 70618 - 71358 (+)
Type: CAZyme
Location: 70618 - 71358 (+)
Gene ID: MGYG000000312_3_63
Type:
Location: 71385 - 72455 (+)
Type:
Location: 71385 - 72455 (+)
Gene ID: MGYG000000312_3_64
Type:
Location: 72688 - 74235 (+)
Type:
Location: 72688 - 74235 (+)
Gene ID: MGYG000000312_3_65
Type: TC
Location: 74232 - 75677 (+)
Type: TC
Location: 74232 - 75677 (+)
Gene ID: MGYG000000312_3_66
Type: pfam
Location: 75724 - 76170 (+)
Type: pfam
Location: 75724 - 76170 (+)
Gene ID: MGYG000000312_3_67
Type: TC
Location: 76181 - 77188 (+)
Type: TC
Location: 76181 - 77188 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.