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Cluster: MGYG000000312_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000000312_24 MGYG000000312_24_4 1317 2165 + GH27
TF MGYG000000312_24 MGYG000000312_24_5 2178 2942 - HTH_AraC | HTH_AraC
pfam MGYG000000312_24 MGYG000000312_24_6 2939 4774 - His_kinase
CAZyme MGYG000000312_24 MGYG000000312_24_7 4950 6497 + GH51_1
pfam MGYG000000312_24 MGYG000000312_24_8 6502 8127 + DUF3502
TC MGYG000000312_24 MGYG000000312_24_9 8228 9160 + 3.A.1.1.29
pfam MGYG000000312_24 MGYG000000312_24_10 9298 9699 - Transposase_20
pfam MGYG000000312_24 MGYG000000312_24_11 10056 10460 - DEDD_Tnp_IS110
TC MGYG000000312_24 MGYG000000312_24_12 10727 11623 + 3.A.1.1.29
CAZyme MGYG000000312_24 MGYG000000312_24_13 11662 13605 + GH120
Gene ID: MGYG000000312_24_4
Type: CAZyme
Location: 1317 - 2165 (+)
Gene ID: MGYG000000312_24_5
Type: TF
Location: 2178 - 2942 (-)
Gene ID: MGYG000000312_24_6
Type: pfam
Location: 2939 - 4774 (-)
Gene ID: MGYG000000312_24_7
Type: CAZyme
Location: 4950 - 6497 (+)
Gene ID: MGYG000000312_24_8
Type: pfam
Location: 6502 - 8127 (+)
Gene ID: MGYG000000312_24_9
Type: TC
Location: 8228 - 9160 (+)
Gene ID: MGYG000000312_24_10
Type: pfam
Location: 9298 - 9699 (-)
Gene ID: MGYG000000312_24_11
Type: pfam
Location: 10056 - 10460 (-)
Gene ID: MGYG000000312_24_12
Type: TC
Location: 10727 - 11623 (+)
Gene ID: MGYG000000312_24_13
Type: CAZyme
Location: 11662 - 13605 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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