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Cluster: MGYG000000312_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000312_8 MGYG000000312_8_10 9159 11327 + 3.A.1.135.6
TC MGYG000000312_8 MGYG000000312_8_11 11324 13168 + 3.A.1.135.6
CAZyme MGYG000000312_8 MGYG000000312_8_12 13308 15542 + GH36
peptidase MGYG000000312_8 MGYG000000312_8_13 15813 17618 + M03.UPB
pfam MGYG000000312_8 MGYG000000312_8_14 17964 18797 + PRD | PRD | CAT_RBD
TC MGYG000000312_8 MGYG000000312_8_15 18813 19307 + 4.A.1.1.11
TC MGYG000000312_8 MGYG000000312_8_16 19329 20945 + 8.A.7.1.1
STP MGYG000000312_8 MGYG000000312_8_17 20977 21234 + PTS-HPr
TC MGYG000000312_8 MGYG000000312_8_18 21371 22837 + 4.A.1.1.7
pfam MGYG000000312_8 MGYG000000312_8_19 23097 23822 + Glucosamine_iso
CAZyme MGYG000000312_8 MGYG000000312_8_20 23900 25039 + CE9
Gene ID: MGYG000000312_8_10
Type: TC
Location: 9159 - 11327 (+)
Gene ID: MGYG000000312_8_11
Type: TC
Location: 11324 - 13168 (+)
Gene ID: MGYG000000312_8_12
Type: CAZyme
Location: 13308 - 15542 (+)
Gene ID: MGYG000000312_8_13
Type: peptidase
Location: 15813 - 17618 (+)
Gene ID: MGYG000000312_8_14
Type: pfam
Location: 17964 - 18797 (+)
Gene ID: MGYG000000312_8_15
Type: TC
Location: 18813 - 19307 (+)
Gene ID: MGYG000000312_8_16
Type: TC
Location: 19329 - 20945 (+)
Gene ID: MGYG000000312_8_17
Type: STP
Location: 20977 - 21234 (+)
Gene ID: MGYG000000312_8_18
Type: TC
Location: 21371 - 22837 (+)
Gene ID: MGYG000000312_8_19
Type: pfam
Location: 23097 - 23822 (+)
Gene ID: MGYG000000312_8_20
Type: CAZyme
Location: 23900 - 25039 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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