Cluster: MGYG000000312_CGC15
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000000312
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000312_6 | MGYG000000312_6_85 | 89171 | 92308 | - | GH38 |
| sulfatase | MGYG000000312_6 | MGYG000000312_6_86 | 92399 | 95314 | - | S1_97 |
| CAZyme | MGYG000000312_6 | MGYG000000312_6_87 | 95403 | 97127 | - | CBM34 | GH13_20 |
| TC | MGYG000000312_6 | MGYG000000312_6_88 | 97155 | 98009 | - | 3.A.1.1.2 |
| TC | MGYG000000312_6 | MGYG000000312_6_89 | 98006 | 98902 | - | 3.A.1.1.2 |
| TC | MGYG000000312_6 | MGYG000000312_6_90 | 98970 | 100268 | - | 3.A.1.1.2 |
| TF | MGYG000000312_6 | MGYG000000312_6_91 | 100492 | 101532 | + | LacI |
| TF | MGYG000000312_6 | MGYG000000312_6_92 | 101658 | 102557 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000000312_6 | MGYG000000312_6_93 | 102725 | 104722 | + | GH31_4 |
Gene ID: MGYG000000312_6_85
Type: CAZyme
Location: 89171 - 92308 (-)
Type: CAZyme
Location: 89171 - 92308 (-)
Gene ID: MGYG000000312_6_86
Type: sulfatase
Location: 92399 - 95314 (-)
Type: sulfatase
Location: 92399 - 95314 (-)
Gene ID: MGYG000000312_6_87
Type: CAZyme
Location: 95403 - 97127 (-)
Type: CAZyme
Location: 95403 - 97127 (-)
Gene ID: MGYG000000312_6_88
Type: TC
Location: 97155 - 98009 (-)
Type: TC
Location: 97155 - 98009 (-)
Gene ID: MGYG000000312_6_89
Type: TC
Location: 98006 - 98902 (-)
Type: TC
Location: 98006 - 98902 (-)
Gene ID: MGYG000000312_6_90
Type: TC
Location: 98970 - 100268 (-)
Type: TC
Location: 98970 - 100268 (-)
Gene ID: MGYG000000312_6_91
Type: TF
Location: 100492 - 101532 (+)
Type: TF
Location: 100492 - 101532 (+)
Gene ID: MGYG000000312_6_92
Type: TF
Location: 101658 - 102557 (-)
Type: TF
Location: 101658 - 102557 (-)
Gene ID: MGYG000000312_6_93
Type: CAZyme
Location: 102725 - 104722 (+)
Type: CAZyme
Location: 102725 - 104722 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.