Cluster: MGYG000000312_CGC14
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000000312
- CGC Family ID: CGCFAM_01126
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000312_6 | MGYG000000312_6_61 | 57165 | 59030 | - | 3.A.1.106.2 |
| CAZyme | MGYG000000312_6 | MGYG000000312_6_62 | 59134 | 61671 | - | GH2 |
| CAZyme | MGYG000000312_6 | MGYG000000312_6_63 | 61762 | 63618 | - | GH20 |
| CAZyme | MGYG000000312_6 | MGYG000000312_6_64 | 63609 | 65957 | - | GH3 |
| sulfatase | MGYG000000312_6 | MGYG000000312_6_65 | 65959 | 67431 | - | S1_61 |
| TF | MGYG000000312_6 | MGYG000000312_6_66 | 67447 | 68202 | - | HTH_AraC |
| TC | MGYG000000312_6 | MGYG000000312_6_67 | 68177 | 69961 | - | 8.A.59.2.1 |
| STP | MGYG000000312_6 | MGYG000000312_6_68 | 70201 | 71703 | - | SBP_bac_1 |
| TC | MGYG000000312_6 | MGYG000000312_6_69 | 71823 | 72773 | - | 3.A.1.1.29 |
| TC | MGYG000000312_6 | MGYG000000312_6_70 | 72786 | 73733 | - | 3.A.1.1.10 |
| sulfatase | MGYG000000312_6 | MGYG000000312_6_71 | 74044 | 74325 | + | S1_46 |
| sulfatase | MGYG000000312_6 | MGYG000000312_6_72 | 74280 | 75479 | + | S1_46 |
| CAZyme | MGYG000000312_6 | MGYG000000312_6_73 | 75708 | 77000 | - | GH125 |
| TC | MGYG000000312_6 | MGYG000000312_6_74 | 77447 | 79330 | + | 2.A.16.2.2 |
Gene ID: MGYG000000312_6_61
Type: TC
Location: 57165 - 59030 (-)
Type: TC
Location: 57165 - 59030 (-)
Gene ID: MGYG000000312_6_62
Type: CAZyme
Location: 59134 - 61671 (-)
Type: CAZyme
Location: 59134 - 61671 (-)
Gene ID: MGYG000000312_6_63
Type: CAZyme
Location: 61762 - 63618 (-)
Type: CAZyme
Location: 61762 - 63618 (-)
Gene ID: MGYG000000312_6_64
Type: CAZyme
Location: 63609 - 65957 (-)
Type: CAZyme
Location: 63609 - 65957 (-)
Gene ID: MGYG000000312_6_65
Type: sulfatase
Location: 65959 - 67431 (-)
Type: sulfatase
Location: 65959 - 67431 (-)
Gene ID: MGYG000000312_6_66
Type: TF
Location: 67447 - 68202 (-)
Type: TF
Location: 67447 - 68202 (-)
Gene ID: MGYG000000312_6_67
Type: TC
Location: 68177 - 69961 (-)
Type: TC
Location: 68177 - 69961 (-)
Gene ID: MGYG000000312_6_68
Type: STP
Location: 70201 - 71703 (-)
Type: STP
Location: 70201 - 71703 (-)
Gene ID: MGYG000000312_6_69
Type: TC
Location: 71823 - 72773 (-)
Type: TC
Location: 71823 - 72773 (-)
Gene ID: MGYG000000312_6_70
Type: TC
Location: 72786 - 73733 (-)
Type: TC
Location: 72786 - 73733 (-)
Gene ID: MGYG000000312_6_71
Type: sulfatase
Location: 74044 - 74325 (+)
Type: sulfatase
Location: 74044 - 74325 (+)
Gene ID: MGYG000000312_6_72
Type: sulfatase
Location: 74280 - 75479 (+)
Type: sulfatase
Location: 74280 - 75479 (+)
Gene ID: MGYG000000312_6_73
Type: CAZyme
Location: 75708 - 77000 (-)
Type: CAZyme
Location: 75708 - 77000 (-)
Gene ID: MGYG000000312_6_74
Type: TC
Location: 77447 - 79330 (+)
Type: TC
Location: 77447 - 79330 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.