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Cluster: MGYG000000304_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000304_6 MGYG000000304_6_69 78962 80665 - 2.A.33.1.1
pfam MGYG000000304_6 MGYG000000304_6_70 80836 81399 + Ribosomal_S30AE | Ribosom_S30AE_C
TC MGYG000000304_6 MGYG000000304_6_71 81596 82429 - 3.A.1.3.10
TC MGYG000000304_6 MGYG000000304_6_72 82448 83101 - 3.A.1.3.14
TC MGYG000000304_6 MGYG000000304_6_73 83238 84092 - 3.A.1.3.15
pfam MGYG000000304_6 MGYG000000304_6_74 84190 84873 + Acetyltransf_1 | Acetyltransf_4
TC MGYG000000304_6 MGYG000000304_6_75 84923 86308 - 2.A.1.3.61
pfam MGYG000000304_6 MGYG000000304_6_76 86616 87029 + DUF997
TC MGYG000000304_6 MGYG000000304_6_77 87026 88618 + 2.A.21.1.1
pfam MGYG000000304_6 MGYG000000304_6_78 88615 89097 + VanZ
pfam MGYG000000304_6 MGYG000000304_6_79 89155 89628 + Usp
CAZyme MGYG000000304_6 MGYG000000304_6_80 89856 91037 - GT2
Gene ID: MGYG000000304_6_69
Type: TC
Location: 78962 - 80665 (-)
Gene ID: MGYG000000304_6_70
Type: pfam
Location: 80836 - 81399 (+)
Gene ID: MGYG000000304_6_71
Type: TC
Location: 81596 - 82429 (-)
Gene ID: MGYG000000304_6_72
Type: TC
Location: 82448 - 83101 (-)
Gene ID: MGYG000000304_6_73
Type: TC
Location: 83238 - 84092 (-)
Gene ID: MGYG000000304_6_74
Type: pfam
Location: 84190 - 84873 (+)
Gene ID: MGYG000000304_6_75
Type: TC
Location: 84923 - 86308 (-)
Gene ID: MGYG000000304_6_76
Type: pfam
Location: 86616 - 87029 (+)
Gene ID: MGYG000000304_6_77
Type: TC
Location: 87026 - 88618 (+)
Gene ID: MGYG000000304_6_78
Type: pfam
Location: 88615 - 89097 (+)
Gene ID: MGYG000000304_6_79
Type: pfam
Location: 89155 - 89628 (+)
Gene ID: MGYG000000304_6_80
Type: CAZyme
Location: 89856 - 91037 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000000304_6_70 vegetarian > omnivore 1.40208 0.00168
MGYG000000304_6_70 vegetarian > vegan 4.02236 0.00909
MGYG000000304_6_76 vegetarian > omnivore 1.83846 0.00168
MGYG000000304_6_76 vegetarian > vegan 2.30554 0.00909
MGYG000000304_6_79 vegetarian > omnivore 1.90568 0.00168
MGYG000000304_6_79 vegetarian > vegan 2.29591 0.00909

🧭 Explore Read Mapping of CGC

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