Cluster: MGYG000000304_CGC5
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000304
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000304_6 | MGYG000000304_6_69 | 78962 | 80665 | - | 2.A.33.1.1 |
| pfam | MGYG000000304_6 | MGYG000000304_6_70 | 80836 | 81399 | + | Ribosomal_S30AE | Ribosom_S30AE_C |
| TC | MGYG000000304_6 | MGYG000000304_6_71 | 81596 | 82429 | - | 3.A.1.3.10 |
| TC | MGYG000000304_6 | MGYG000000304_6_72 | 82448 | 83101 | - | 3.A.1.3.14 |
| TC | MGYG000000304_6 | MGYG000000304_6_73 | 83238 | 84092 | - | 3.A.1.3.15 |
| pfam | MGYG000000304_6 | MGYG000000304_6_74 | 84190 | 84873 | + | Acetyltransf_1 | Acetyltransf_4 |
| TC | MGYG000000304_6 | MGYG000000304_6_75 | 84923 | 86308 | - | 2.A.1.3.61 |
| pfam | MGYG000000304_6 | MGYG000000304_6_76 | 86616 | 87029 | + | DUF997 |
| TC | MGYG000000304_6 | MGYG000000304_6_77 | 87026 | 88618 | + | 2.A.21.1.1 |
| pfam | MGYG000000304_6 | MGYG000000304_6_78 | 88615 | 89097 | + | VanZ |
| pfam | MGYG000000304_6 | MGYG000000304_6_79 | 89155 | 89628 | + | Usp |
| CAZyme | MGYG000000304_6 | MGYG000000304_6_80 | 89856 | 91037 | - | GT2 |
Gene ID: MGYG000000304_6_69
Type: TC
Location: 78962 - 80665 (-)
Type: TC
Location: 78962 - 80665 (-)
Gene ID: MGYG000000304_6_70
Type: pfam
Location: 80836 - 81399 (+)
Type: pfam
Location: 80836 - 81399 (+)
Gene ID: MGYG000000304_6_71
Type: TC
Location: 81596 - 82429 (-)
Type: TC
Location: 81596 - 82429 (-)
Gene ID: MGYG000000304_6_72
Type: TC
Location: 82448 - 83101 (-)
Type: TC
Location: 82448 - 83101 (-)
Gene ID: MGYG000000304_6_73
Type: TC
Location: 83238 - 84092 (-)
Type: TC
Location: 83238 - 84092 (-)
Gene ID: MGYG000000304_6_74
Type: pfam
Location: 84190 - 84873 (+)
Type: pfam
Location: 84190 - 84873 (+)
Gene ID: MGYG000000304_6_75
Type: TC
Location: 84923 - 86308 (-)
Type: TC
Location: 84923 - 86308 (-)
Gene ID: MGYG000000304_6_76
Type: pfam
Location: 86616 - 87029 (+)
Type: pfam
Location: 86616 - 87029 (+)
Gene ID: MGYG000000304_6_77
Type: TC
Location: 87026 - 88618 (+)
Type: TC
Location: 87026 - 88618 (+)
Gene ID: MGYG000000304_6_78
Type: pfam
Location: 88615 - 89097 (+)
Type: pfam
Location: 88615 - 89097 (+)
Gene ID: MGYG000000304_6_79
Type: pfam
Location: 89155 - 89628 (+)
Type: pfam
Location: 89155 - 89628 (+)
Gene ID: MGYG000000304_6_80
Type: CAZyme
Location: 89856 - 91037 (-)
Type: CAZyme
Location: 89856 - 91037 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Anaerotardibacter
Species
Anaerotardibacter sp900542525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000304_6_70 | vegetarian > omnivore | 1.40208 | 0.00168 |
| MGYG000000304_6_70 | vegetarian > vegan | 4.02236 | 0.00909 |
| MGYG000000304_6_76 | vegetarian > omnivore | 1.83846 | 0.00168 |
| MGYG000000304_6_76 | vegetarian > vegan | 2.30554 | 0.00909 |
| MGYG000000304_6_79 | vegetarian > omnivore | 1.90568 | 0.00168 |
| MGYG000000304_6_79 | vegetarian > vegan | 2.29591 | 0.00909 |