Cluster: MGYG000000299_CGC4
🧬 Cluster Details
- Gene Count: 22
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000299
- CGC Family ID: CGCFAM_08896
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000299_2 | MGYG000000299_2_57 | 65273 | 66280 | + | 3.A.1.1.19 |
| TC | MGYG000000299_2 | MGYG000000299_2_58 | 66292 | 67170 | + | 3.A.1.1.25 |
| STP | MGYG000000299_2 | MGYG000000299_2_59 | 67202 | 68557 | + | SBP_bac_1 |
| CAZyme | MGYG000000299_2 | MGYG000000299_2_60 | 68689 | 70185 | + | GH36 |
| pfam | MGYG000000299_2 | MGYG000000299_2_61 | 70374 | 71651 | + | DAO | FAD_binding_3 | Lycopene_cycl | NAD_binding_8 |
| TC | MGYG000000299_2 | MGYG000000299_2_62 | 71686 | 72045 | + | 3.D.1.2.1 |
| TC | MGYG000000299_2 | MGYG000000299_2_63 | 72061 | 72615 | + | 3.D.1.3.1 |
| TC | MGYG000000299_2 | MGYG000000299_2_64 | 72612 | 73307 | + | 3.D.1.1.1 |
| TC | MGYG000000299_2 | MGYG000000299_2_65 | 73307 | 74656 | + | 3.D.1.3.1 |
| TC | MGYG000000299_2 | MGYG000000299_2_66 | 74653 | 75351 | + | 3.D.1.3.1 |
| TC | MGYG000000299_2 | MGYG000000299_2_67 | 75344 | 76639 | + | 3.D.1.1.1 |
| TC | MGYG000000299_2 | MGYG000000299_2_68 | 76636 | 79200 | + | 3.D.1.2.1 |
| TC | MGYG000000299_2 | MGYG000000299_2_69 | 79197 | 80519 | + | 3.D.1.5.1 |
| TC | MGYG000000299_2 | MGYG000000299_2_70 | 80512 | 81171 | + | 3.D.1.3.1 |
| pfam | MGYG000000299_2 | MGYG000000299_2_71 | 81168 | 82115 | + | Oxidored_q3 |
| TC | MGYG000000299_2 | MGYG000000299_2_72 | 82112 | 82411 | + | 3.D.1.3.1 |
| TC | MGYG000000299_2 | MGYG000000299_2_73 | 82425 | 84401 | + | 3.D.1.3.1 |
| TC | MGYG000000299_2 | MGYG000000299_2_74 | 84422 | 85969 | + | 3.D.1.2.1 |
| TC | MGYG000000299_2 | MGYG000000299_2_75 | 85966 | 87537 | + | 3.D.1.2.1 |
| pfam | MGYG000000299_2 | MGYG000000299_2_76 | 87534 | 88544 | + | polyprenyl_synt |
| STP | MGYG000000299_2 | MGYG000000299_2_77 | 88664 | 90166 | + | Pyr_redox_2 |
| TC | MGYG000000299_2 | MGYG000000299_2_78 | 90188 | 91069 | + | 9.B.1.1.5 |
Gene ID: MGYG000000299_2_57
Type: TC
Location: 65273 - 66280 (+)
Type: TC
Location: 65273 - 66280 (+)
Gene ID: MGYG000000299_2_58
Type: TC
Location: 66292 - 67170 (+)
Type: TC
Location: 66292 - 67170 (+)
Gene ID: MGYG000000299_2_59
Type: STP
Location: 67202 - 68557 (+)
Type: STP
Location: 67202 - 68557 (+)
Gene ID: MGYG000000299_2_60
Type: CAZyme
Location: 68689 - 70185 (+)
Type: CAZyme
Location: 68689 - 70185 (+)
Gene ID: MGYG000000299_2_61
Type: pfam
Location: 70374 - 71651 (+)
Type: pfam
Location: 70374 - 71651 (+)
Gene ID: MGYG000000299_2_62
Type: TC
Location: 71686 - 72045 (+)
Type: TC
Location: 71686 - 72045 (+)
Gene ID: MGYG000000299_2_63
Type: TC
Location: 72061 - 72615 (+)
Type: TC
Location: 72061 - 72615 (+)
Gene ID: MGYG000000299_2_64
Type: TC
Location: 72612 - 73307 (+)
Type: TC
Location: 72612 - 73307 (+)
Gene ID: MGYG000000299_2_65
Type: TC
Location: 73307 - 74656 (+)
Type: TC
Location: 73307 - 74656 (+)
Gene ID: MGYG000000299_2_66
Type: TC
Location: 74653 - 75351 (+)
Type: TC
Location: 74653 - 75351 (+)
Gene ID: MGYG000000299_2_67
Type: TC
Location: 75344 - 76639 (+)
Type: TC
Location: 75344 - 76639 (+)
Gene ID: MGYG000000299_2_68
Type: TC
Location: 76636 - 79200 (+)
Type: TC
Location: 76636 - 79200 (+)
Gene ID: MGYG000000299_2_69
Type: TC
Location: 79197 - 80519 (+)
Type: TC
Location: 79197 - 80519 (+)
Gene ID: MGYG000000299_2_70
Type: TC
Location: 80512 - 81171 (+)
Type: TC
Location: 80512 - 81171 (+)
Gene ID: MGYG000000299_2_71
Type: pfam
Location: 81168 - 82115 (+)
Type: pfam
Location: 81168 - 82115 (+)
Gene ID: MGYG000000299_2_72
Type: TC
Location: 82112 - 82411 (+)
Type: TC
Location: 82112 - 82411 (+)
Gene ID: MGYG000000299_2_73
Type: TC
Location: 82425 - 84401 (+)
Type: TC
Location: 82425 - 84401 (+)
Gene ID: MGYG000000299_2_74
Type: TC
Location: 84422 - 85969 (+)
Type: TC
Location: 84422 - 85969 (+)
Gene ID: MGYG000000299_2_75
Type: TC
Location: 85966 - 87537 (+)
Type: TC
Location: 85966 - 87537 (+)
Gene ID: MGYG000000299_2_76
Type: pfam
Location: 87534 - 88544 (+)
Type: pfam
Location: 87534 - 88544 (+)
Gene ID: MGYG000000299_2_77
Type: STP
Location: 88664 - 90166 (+)
Type: STP
Location: 88664 - 90166 (+)
Gene ID: MGYG000000299_2_78
Type: TC
Location: 90188 - 91069 (+)
Type: TC
Location: 90188 - 91069 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia sp900541895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.