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Cluster: MGYG000000290_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000000290_17 MGYG000000290_17_21 22826 23995 - CE9
STP MGYG000000290_17 MGYG000000290_17_22 24115 25281 - SIS | SIS
TF MGYG000000290_17 MGYG000000290_17_23 25396 26127 - GntR
TC MGYG000000290_17 MGYG000000290_17_24 26312 27394 - 4.A.6.1.4
TC MGYG000000290_17 MGYG000000290_17_25 27384 28184 - 4.A.6.1.4
TC MGYG000000290_17 MGYG000000290_17_26 28275 28757 - 4.A.6.1.4
pfam MGYG000000290_17 MGYG000000290_17_27 28794 29075 - YajC
TC MGYG000000290_17 MGYG000000290_17_28 29075 29518 - 4.A.6.1.16
Gene ID: MGYG000000290_17_21
Type: CAZyme
Location: 22826 - 23995 (-)
Gene ID: MGYG000000290_17_22
Type: STP
Location: 24115 - 25281 (-)
Gene ID: MGYG000000290_17_23
Type: TF
Location: 25396 - 26127 (-)
Gene ID: MGYG000000290_17_24
Type: TC
Location: 26312 - 27394 (-)
Gene ID: MGYG000000290_17_25
Type: TC
Location: 27384 - 28184 (-)
Gene ID: MGYG000000290_17_26
Type: TC
Location: 28275 - 28757 (-)
Gene ID: MGYG000000290_17_27
Type: pfam
Location: 28794 - 29075 (-)
Gene ID: MGYG000000290_17_28
Type: TC
Location: 29075 - 29518 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000000290_17_27 vegan > omnivore 1.04901 0.00566

🧭 Explore Read Mapping of CGC

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