Cluster: MGYG000000290_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000290
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000290_17 | MGYG000000290_17_6 | 4582 | 4920 | - | 4.A.3.1.2 |
| TF | MGYG000000290_17 | MGYG000000290_17_7 | 5135 | 6265 | - | LacI |
| TC | MGYG000000290_17 | MGYG000000290_17_8 | 6496 | 8271 | + | 4.A.3.1.1 |
| CAZyme | MGYG000000290_17 | MGYG000000290_17_9 | 8339 | 9778 | + | GH1 |
| TF | MGYG000000290_17 | MGYG000000290_17_10 | 10123 | 11124 | - | LacI |
| TC | MGYG000000290_17 | MGYG000000290_17_11 | 11409 | 13187 | + | 4.A.3.1.1 |
| CAZyme | MGYG000000290_17 | MGYG000000290_17_12 | 13263 | 14684 | + | GH1 |
Gene ID: MGYG000000290_17_6
Type: TC
Location: 4582 - 4920 (-)
Type: TC
Location: 4582 - 4920 (-)
Gene ID: MGYG000000290_17_7
Type: TF
Location: 5135 - 6265 (-)
Type: TF
Location: 5135 - 6265 (-)
Gene ID: MGYG000000290_17_8
Type: TC
Location: 6496 - 8271 (+)
Type: TC
Location: 6496 - 8271 (+)
Gene ID: MGYG000000290_17_9
Type: CAZyme
Location: 8339 - 9778 (+)
Type: CAZyme
Location: 8339 - 9778 (+)
Gene ID: MGYG000000290_17_10
Type: TF
Location: 10123 - 11124 (-)
Type: TF
Location: 10123 - 11124 (-)
Gene ID: MGYG000000290_17_11
Type: TC
Location: 11409 - 13187 (+)
Type: TC
Location: 11409 - 13187 (+)
Gene ID: MGYG000000290_17_12
Type: CAZyme
Location: 13263 - 14684 (+)
Type: CAZyme
Location: 13263 - 14684 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900540995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.