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Cluster: KY235_bin.82_sub_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_210269 k141_210269_30 31028 32104 + GT28
pfam k141_210269 k141_210269_31 32141 32551 - HIT | DcpS_C
pfam k141_210269 k141_210269_32 32569 33609 - SCP2
CAZyme k141_210269 k141_210269_33 33668 34984 - GH1
CAZyme k141_210269 k141_210269_34 34996 37425 - GH94
TF k141_210269 k141_210269_35 37817 38830 + LacI
NULL(UNKNOWN) k141_210269 k141_210269_36 38880 40292 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_210269 k141_210269_37 40507 41424 + 3.A.1.1.4
TC k141_210269 k141_210269_38 41436 42299 + 3.A.1.1.36
Gene ID: k141_210269_30
Type: CAZyme
Location: 31028 - 32104 (+)
Gene ID: k141_210269_31
Type: pfam
Location: 32141 - 32551 (-)
Gene ID: k141_210269_32
Type: pfam
Location: 32569 - 33609 (-)
Gene ID: k141_210269_33
Type: CAZyme
Location: 33668 - 34984 (-)
Gene ID: k141_210269_34
Type: CAZyme
Location: 34996 - 37425 (-)
Gene ID: k141_210269_35
Type: TF
Location: 37817 - 38830 (+)
Gene ID: k141_210269_36
Type:
Location: 38880 - 40292 (+)
Gene ID: k141_210269_37
Type: TC
Location: 40507 - 41424 (+)
Gene ID: k141_210269_38
Type: TC
Location: 41436 - 42299 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
VSOB01
→
Species
VSOB01 sp934432885

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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