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Cluster: KY235_120_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_284943 k141_284943_39 39029 39721 + 1.C.82.1.1
TF k141_284943 k141_284943_40 40017 40799 - HTH_AraC
CAZyme k141_284943 k141_284943_41 40947 43307 + GH43_29
pfam k141_284943 k141_284943_42 43616 44116 + Ribosomal_L10
pfam k141_284943 k141_284943_43 44161 44526 + Ribosomal_L12 | Ribosomal_L12_N
TC k141_284943 k141_284943_44 44706 46550 + 1.B.52.2.1
pfam k141_284943 k141_284943_45 46892 47608 + His_Phos_1
TC k141_284943 k141_284943_46 47638 48990 + 2.A.66.1.32
pfam k141_284943 k141_284943_47 49010 49762 + Acyl-ACP_TE | Acyl-ACP_TE_C
pfam k141_284943 k141_284943_48 49776 50771 - LytR_cpsA_psr
TC k141_284943 k141_284943_49 50802 52232 - 9.B.18.1.1
peptidase k141_284943 k141_284943_50 52402 54075 + S01.UPC
STP k141_284943 k141_284943_51 54275 55663 + AAA
CAZyme k141_284943 k141_284943_52 56258 58411 + CBM2 | CBM2
Gene ID: k141_284943_39
Type: TC
Location: 39029 - 39721 (+)
Gene ID: k141_284943_40
Type: TF
Location: 40017 - 40799 (-)
Gene ID: k141_284943_41
Type: CAZyme
Location: 40947 - 43307 (+)
Gene ID: k141_284943_42
Type: pfam
Location: 43616 - 44116 (+)
Gene ID: k141_284943_43
Type: pfam
Location: 44161 - 44526 (+)
Gene ID: k141_284943_44
Type: TC
Location: 44706 - 46550 (+)
Gene ID: k141_284943_45
Type: pfam
Location: 46892 - 47608 (+)
Gene ID: k141_284943_46
Type: TC
Location: 47638 - 48990 (+)
Gene ID: k141_284943_47
Type: pfam
Location: 49010 - 49762 (+)
Gene ID: k141_284943_48
Type: pfam
Location: 49776 - 50771 (-)
Gene ID: k141_284943_49
Type: TC
Location: 50802 - 52232 (-)
Gene ID: k141_284943_50
Type: peptidase
Location: 52402 - 54075 (+)
Gene ID: k141_284943_51
Type: STP
Location: 54275 - 55663 (+)
Gene ID: k141_284943_52
Type: CAZyme
Location: 56258 - 58411 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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