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Cluster: KY235_120_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_189043 k141_189043_39 45610 46662 + 3.A.1.2.13
TC k141_189043 k141_189043_40 46798 48309 + 3.A.1.2.23
TC k141_189043 k141_189043_41 48309 49403 + 3.A.1.2.14
TC k141_189043 k141_189043_42 49396 50502 + 3.A.1.2.25
TC k141_189043 k141_189043_43 50719 53298 + 3.A.9.1.2
TF k141_189043 k141_189043_44 53471 54277 - HTH_AraC
TC k141_189043 k141_189043_45 54397 55542 + 3.A.1.2.25
pfam k141_189043 k141_189043_46 55659 56912 + CBM_4_9 | LRR_5
CAZyme k141_189043 k141_189043_47 57035 59191 + CBM91 | GH43_10
CAZyme k141_189043 k141_189043_48 59299 60786 + GH43_16
Gene ID: k141_189043_39
Type: TC
Location: 45610 - 46662 (+)
Gene ID: k141_189043_40
Type: TC
Location: 46798 - 48309 (+)
Gene ID: k141_189043_41
Type: TC
Location: 48309 - 49403 (+)
Gene ID: k141_189043_42
Type: TC
Location: 49396 - 50502 (+)
Gene ID: k141_189043_43
Type: TC
Location: 50719 - 53298 (+)
Gene ID: k141_189043_44
Type: TF
Location: 53471 - 54277 (-)
Gene ID: k141_189043_45
Type: TC
Location: 54397 - 55542 (+)
Gene ID: k141_189043_46
Type: pfam
Location: 55659 - 56912 (+)
Gene ID: k141_189043_47
Type: CAZyme
Location: 57035 - 59191 (+)
Gene ID: k141_189043_48
Type: CAZyme
Location: 59299 - 60786 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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