dbCAN Logo

Cluster: KY235_120_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_15509 k141_15509_14 10026 12566 + 3.A.3.5.15
TC k141_15509 k141_15509_15 12890 13771 + 2.A.4.7.9
TF k141_15509 k141_15509_16 13750 14529 - HTH_AraC
CAZyme k141_15509 k141_15509_17 14695 17160 + GH43_20 | GH43_26
CAZyme k141_15509 k141_15509_18 17192 19939 + CBM91 | GH43_10
CAZyme k141_15509 k141_15509_19 19961 22468 + GH43_20 | GH43_27
NULL(UNKNOWN) k141_15509 k141_15509_20 22550 22825 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_15509 k141_15509_21 22943 23884 + fn3
CAZyme k141_15509 k141_15509_22 23903 27376 + GH95
STP k141_15509 k141_15509_23 27657 27875 + HMA
TC k141_15509 k141_15509_24 27892 29802 + 3.A.3.6.10
Gene ID: k141_15509_14
Type: TC
Location: 10026 - 12566 (+)
Gene ID: k141_15509_15
Type: TC
Location: 12890 - 13771 (+)
Gene ID: k141_15509_16
Type: TF
Location: 13750 - 14529 (-)
Gene ID: k141_15509_17
Type: CAZyme
Location: 14695 - 17160 (+)
Gene ID: k141_15509_18
Type: CAZyme
Location: 17192 - 19939 (+)
Gene ID: k141_15509_19
Type: CAZyme
Location: 19961 - 22468 (+)
Gene ID: k141_15509_20
Type:
Location: 22550 - 22825 (+)
Gene ID: k141_15509_21
Type: pfam
Location: 22943 - 23884 (+)
Gene ID: k141_15509_22
Type: CAZyme
Location: 23903 - 27376 (+)
Gene ID: k141_15509_23
Type: STP
Location: 27657 - 27875 (+)
Gene ID: k141_15509_24
Type: TC
Location: 27892 - 29802 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List