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Cluster: KY235_120_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_178878 k141_178878_10 11430 12317 + 2.A.115.1.2
TC k141_178878 k141_178878_11 12473 13585 + 3.A.1.1.26
TF k141_178878 k141_178878_12 13735 14841 + 0037176
TC k141_178878 k141_178878_13 14887 15597 + 3.A.1.140.1
pfam k141_178878 k141_178878_14 15584 16498 + FtsX | FtsX_ECD
STP k141_178878 k141_178878_15 16526 17914 + Peptidase_M23
TC k141_178878 k141_178878_16 17976 19220 + 9.B.174.1.1
TF k141_178878 k141_178878_17 19343 19999 + Trans_reg_C
TC k141_178878 k141_178878_18 19996 21390 + 2.A.21.9.2
NULL(UNKNOWN) k141_178878 k141_178878_19 21377 22300 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_178878 k141_178878_20 22351 23910 + 3.A.1.3.20
TC k141_178878 k141_178878_21 23894 24637 + 3.A.1.3.25
pfam k141_178878 k141_178878_22 24702 26048 + fn3 | CAP | Big_2
CAZyme k141_178878 k141_178878_23 26166 27527 + GH43_22
Gene ID: k141_178878_10
Type: TC
Location: 11430 - 12317 (+)
Gene ID: k141_178878_11
Type: TC
Location: 12473 - 13585 (+)
Gene ID: k141_178878_12
Type: TF
Location: 13735 - 14841 (+)
Gene ID: k141_178878_13
Type: TC
Location: 14887 - 15597 (+)
Gene ID: k141_178878_14
Type: pfam
Location: 15584 - 16498 (+)
Gene ID: k141_178878_15
Type: STP
Location: 16526 - 17914 (+)
Gene ID: k141_178878_16
Type: TC
Location: 17976 - 19220 (+)
Gene ID: k141_178878_17
Type: TF
Location: 19343 - 19999 (+)
Gene ID: k141_178878_18
Type: TC
Location: 19996 - 21390 (+)
Gene ID: k141_178878_19
Type:
Location: 21377 - 22300 (+)
Gene ID: k141_178878_20
Type: TC
Location: 22351 - 23910 (+)
Gene ID: k141_178878_21
Type: TC
Location: 23894 - 24637 (+)
Gene ID: k141_178878_22
Type: pfam
Location: 24702 - 26048 (+)
Gene ID: k141_178878_23
Type: CAZyme
Location: 26166 - 27527 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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