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Cluster: KY230_bin.42_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_88232 k141_88232_40 42978 44669 + 4.A.3.1.1
CAZyme k141_88232 k141_88232_41 45581 47002 - GH1
TC k141_88232 k141_88232_42 47079 48857 - 4.A.3.1.1
TF k141_88232 k141_88232_43 49141 50142 + LacI
TC k141_88232 k141_88232_44 50475 52235 - 4.A.3.1.1
CAZyme k141_88232 k141_88232_45 52412 53854 - GH1
TF k141_88232 k141_88232_46 54196 55233 + LacI
CAZyme k141_88232 k141_88232_47 55495 56934 - GH1
TC k141_88232 k141_88232_48 57001 58776 - 4.A.3.1.1
TF k141_88232 k141_88232_49 59134 60138 + LacI
TC k141_88232 k141_88232_50 60353 60691 + 4.A.3.1.2
Gene ID: k141_88232_40
Type: TC
Location: 42978 - 44669 (+)
Gene ID: k141_88232_41
Type: CAZyme
Location: 45581 - 47002 (-)
Gene ID: k141_88232_42
Type: TC
Location: 47079 - 48857 (-)
Gene ID: k141_88232_43
Type: TF
Location: 49141 - 50142 (+)
Gene ID: k141_88232_44
Type: TC
Location: 50475 - 52235 (-)
Gene ID: k141_88232_45
Type: CAZyme
Location: 52412 - 53854 (-)
Gene ID: k141_88232_46
Type: TF
Location: 54196 - 55233 (+)
Gene ID: k141_88232_47
Type: CAZyme
Location: 55495 - 56934 (-)
Gene ID: k141_88232_48
Type: TC
Location: 57001 - 58776 (-)
Gene ID: k141_88232_49
Type: TF
Location: 59134 - 60138 (+)
Gene ID: k141_88232_50
Type: TC
Location: 60353 - 60691 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_88232_46 vegetarian > omnivore 1.01664 0.03181

🧭 Explore Read Mapping of CGC

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