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Cluster: KY230_bin.42_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_88232 k141_88232_28 29333 30820 + 4.A.1.1.7
TF k141_88232 k141_88232_29 31054 31785 + GntR
CAZyme k141_88232 k141_88232_30 31929 33098 + CE9
pfam k141_88232 k141_88232_31 33131 33604 + DUF386
TC k141_88232 k141_88232_32 34035 34517 + 4.A.6.1.5
TF k141_88232 k141_88232_33 35050 35784 + GntR
STP k141_88232 k141_88232_34 35896 37062 + SIS | SIS
CAZyme k141_88232 k141_88232_35 37182 38351 + CE9
Gene ID: k141_88232_28
Type: TC
Location: 29333 - 30820 (+)
Gene ID: k141_88232_29
Type: TF
Location: 31054 - 31785 (+)
Gene ID: k141_88232_30
Type: CAZyme
Location: 31929 - 33098 (+)
Gene ID: k141_88232_31
Type: pfam
Location: 33131 - 33604 (+)
Gene ID: k141_88232_32
Type: TC
Location: 34035 - 34517 (+)
Gene ID: k141_88232_33
Type: TF
Location: 35050 - 35784 (+)
Gene ID: k141_88232_34
Type: STP
Location: 35896 - 37062 (+)
Gene ID: k141_88232_35
Type: CAZyme
Location: 37182 - 38351 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_88232_29 vegetarian > vegan 3.37334 0.02517

🧭 Explore Read Mapping of CGC

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